RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 CDX4O14627 284 aaPredicted RBP13.88□□□□□ -0.19
VARS-215ENST00000375663 MLNRO43193 412 aa13.88□□□□□ -0.19
VARS-215ENST00000375663 RELQ04864 619 aaPredicted RBP13.88□□□□□ -0.19
VARS-215ENST00000375663 PNKDQ8N490 385 aa13.88□□□□□ -0.19
VARS-215ENST00000375663 IGHV1-69-2A0A0G2JMI3 117 aa13.87□□□□□ -0.19
VARS-215ENST00000375663 MGPP08493 103 aa13.87□□□□□ -0.19
VARS-215ENST00000375663 HAPLN4Q86UW8 402 aa13.87□□□□□ -0.19
VARS-215ENST00000375663 ZCCHC24Q8N2G6 241 aaKnown RBP13.87□□□□□ -0.19
VARS-215ENST00000375663 CRIM1Q9NZV1 1036 aa13.87□□□□□ -0.19
VARS-215ENST00000375663 RPS20P60866 119 aaKnown RBP13.87□□□□□ -0.19
VARS-215ENST00000375663 C2orf83Q53S99 150 aa13.87□□□□□ -0.19
VARS-215ENST00000375663 LYRM7Q5U5X0 104 aa13.87□□□□□ -0.19
VARS-215ENST00000375663 YLPM1P49750 1951 aaKnown RBP13.87□□□□□ -0.19
VARS-215ENST00000375663 CGB1A6NKQ9 187 aa13.87□□□□□ -0.19
VARS-215ENST00000375663 MYOD1P15172 320 aa13.87□□□□□ -0.19
VARS-215ENST00000375663 C10orf55Q5SWW7 151 aa13.87□□□□□ -0.19
VARS-215ENST00000375663 ZNF414Q96IQ9 312 aa13.87□□□□□ -0.19
VARS-215ENST00000375663 RPUSD1Q9UJJ7 312 aaKnown RBP13.87□□□□□ -0.19
VARS-215ENST00000375663 ZNF257Q9Y2Q1 563 aa13.87□□□□□ -0.19
VARS-215ENST00000375663 MUC21A0A0G2JKD1 596 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 MUC21A0A140T8X8 626 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 MUC21Q5SSG8 566 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 S4R3C0 116 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 GTF3C1Q12789 2109 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.86□□□□□ -0.19
VARS-215ENST00000375663 CIDEAO60543 219 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 LCN12Q6JVE5 192 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 CDPF1Q6NVV7 123 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 NUDT10Q8NFP7 164 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 TSKUQ8WUA8 353 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 NUDT11Q96G61 164 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 A1L4Q6 167 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 CX3CL1P78423 397 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 PRELID3AQ96N28 172 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 LY96Q9Y6Y9 160 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 NIT1Q86X76 327 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 TEX45Q8NA69 505 aa13.86□□□□□ -0.19
VARS-215ENST00000375663 PCNX3Q9H6A9 2034 aa13.85□□□□□ -0.19
VARS-215ENST00000375663 C17orf100A8MU93 164 aa13.85□□□□□ -0.19
VARS-215ENST00000375663 FAM53AQ6NSI3 398 aaPredicted RBP13.85□□□□□ -0.19
VARS-215ENST00000375663 ALKBH7Q9BT30 221 aaPredicted RBP13.85□□□□□ -0.19
VARS-215ENST00000375663 GPX1P07203 203 aa13.85□□□□□ -0.19
VARS-215ENST00000375663 C3orf79P0CE67 100 aa13.85□□□□□ -0.19
VARS-215ENST00000375663 PSG9Q00887 426 aa13.85□□□□□ -0.19
VARS-215ENST00000375663 SAPCD1Q5SSQ6 148 aa13.85□□□□□ -0.19
VARS-215ENST00000375663 POLR3KQ9Y2Y1 108 aaPredicted RBP13.85□□□□□ -0.19
VARS-215ENST00000375663 LINC00614P0C842 121 aa13.85□□□□□ -0.19
VARS-215ENST00000375663 C18orf15Q96N68 181 aa13.85□□□□□ -0.19
VARS-215ENST00000375663 M0QZ24 198 aa13.84□□□□□ -0.19
VARS-215ENST00000375663 HERVK_113P61574 105 aa13.84□□□□□ -0.19
VARS-215ENST00000375663 SNHG12Q9BXW3 62 aa13.84□□□□□ -0.19
VARS-215ENST00000375663 TYMSP04818 313 aa13.84□□□□□ -0.19
VARS-215ENST00000375663 LPAR2Q9HBW0 351 aa13.84□□□□□ -0.19
VARS-215ENST00000375663 RABAC1Q9UI14 185 aa13.84□□□□□ -0.19
VARS-215ENST00000375663 PTPN13Q12923 2485 aa13.84□□□□□ -0.19
VARS-215ENST00000375663 NUP210Q8TEM1 1887 aaPredicted RBP13.84□□□□□ -0.19
VARS-215ENST00000375663 C7orf71A4D174 169 aa13.84□□□□□ -0.19
VARS-215ENST00000375663 ZNF503-AS2A6NEH8 195 aa13.83□□□□□ -0.2
VARS-215ENST00000375663 TMEM208Q9BTX3 173 aa13.83□□□□□ -0.2
VARS-215ENST00000375663 PRR31Q5SQ13 230 aa13.83□□□□□ -0.2
VARS-215ENST00000375663 UNQ5815/PRO19632Q6UWF5 114 aa13.83□□□□□ -0.2
VARS-215ENST00000375663 TDGF1P3P51864 188 aa13.83□□□□□ -0.2
VARS-215ENST00000375663 ZNF502Q8TBZ5 544 aa13.83□□□□□ -0.2
VARS-215ENST00000375663 IGKV1D-17A0A075B6S4 117 aa13.82□□□□□ -0.2
VARS-215ENST00000375663 CCL21O00585 134 aa13.82□□□□□ -0.2
VARS-215ENST00000375663 BSPH1Q075Z2 132 aa13.82□□□□□ -0.2
VARS-215ENST00000375663 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.82□□□□□ -0.2
VARS-215ENST00000375663 LY6G6EA0A0G2JKS1 128 aa13.82□□□□□ -0.2
VARS-215ENST00000375663 PRB3Q04118 309 aaPredicted RBP13.82□□□□□ -0.2
VARS-215ENST00000375663 FBLN7Q53RD9 439 aa13.82□□□□□ -0.2
VARS-215ENST00000375663 CIARTQ8N365 385 aaPredicted RBP13.82□□□□□ -0.2
VARS-215ENST00000375663 OTORQ9NRC9 128 aa13.82□□□□□ -0.2
VARS-215ENST00000375663 U3KQA8 63 aa13.82□□□□□ -0.2
VARS-215ENST00000375663 IGHV1-46P01743 117 aa13.81□□□□□ -0.2
VARS-215ENST00000375663 MLANAQ16655 118 aa13.81□□□□□ -0.2
VARS-215ENST00000375663 LHFPL4Q7Z7J7 247 aa13.81□□□□□ -0.2
VARS-215ENST00000375663 MDS2Q8NDY4 140 aa13.81□□□□□ -0.2
VARS-215ENST00000375663 Q8NFD4 153 aa13.81□□□□□ -0.2
VARS-215ENST00000375663 PSMB2P49721 201 aa13.81□□□□□ -0.2
VARS-215ENST00000375663 Q6AWC8 147 aa13.81□□□□□ -0.2
VARS-215ENST00000375663 ATP5L2Q7Z4Y8 100 aa13.81□□□□□ -0.2
VARS-215ENST00000375663 C16orf92Q96LL3 132 aa13.81□□□□□ -0.2
VARS-215ENST00000375663 ORMDL3Q8N138 153 aa13.81□□□□□ -0.2
VARS-215ENST00000375663 IGHV3OR16-13A0A075B7E8 117 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 IGHV3-74A0A0B4J1X5 117 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 FAM106CPP0CH98 169 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 LMO1P25800 156 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 WDR86Q86TI4 376 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 ZNF114Q8NC26 417 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 RNF138Q8WVD3 245 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 HIST1H4GQ99525 98 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 GPR183P32249 361 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 PPP1R27Q86WC6 154 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 WFDC3Q8IUB2 231 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 METTL26Q96S19 204 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 KLK15Q9H2R5 256 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 PLSCR4Q9NRQ2 329 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 BRCA2P51587 3418 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 BPTFQ12830 3046 aa13.8□□□□□ -0.2
VARS-215ENST00000375663 TRBV20OR9-2A0A075B6H5 130 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms