RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 LINC00854A0A1B0GVQ3 168 aa11.54□□□□□ -0.56
SDHB-201ENST00000375499 OR4C46A6NHA9 309 aa11.54□□□□□ -0.56
SDHB-201ENST00000375499 DFFBO76075 338 aa11.54□□□□□ -0.56
SDHB-201ENST00000375499 SFT2D2O95562 160 aa11.54□□□□□ -0.56
SDHB-201ENST00000375499 SRPXP78539 464 aa11.54□□□□□ -0.56
SDHB-201ENST00000375499 RBMS2Q15434 407 aaKnown RBP11.54□□□□□ -0.56
SDHB-201ENST00000375499 APRG1Q8IVJ8 170 aa11.54□□□□□ -0.56
SDHB-201ENST00000375499 CENPSQ8N2Z9 138 aa11.54□□□□□ -0.56
SDHB-201ENST00000375499 FAM24BQ8N5W8 94 aa11.54□□□□□ -0.56
SDHB-201ENST00000375499 LRTM2Q8N967 370 aa11.54□□□□□ -0.56
SDHB-201ENST00000375499 RNASEH2CQ8TDP1 164 aaKnown RBP11.54□□□□□ -0.56
SDHB-201ENST00000375499 RPS10-NUDT3A0A1W2PQS6 291 aa11.53□□□□□ -0.56
SDHB-201ENST00000375499 TRIQKQ629K1 86 aa11.53□□□□□ -0.56
SDHB-201ENST00000375499 OR1S1Q8NH92 325 aa11.53□□□□□ -0.56
SDHB-201ENST00000375499 OVOL2Q9BRP0 275 aa11.53□□□□□ -0.56
SDHB-201ENST00000375499 MAP6D1Q9H9H5 199 aa11.53□□□□□ -0.56
SDHB-201ENST00000375499 DUXBA0A1W2PPF3 345 aa11.52□□□□□ -0.57
SDHB-201ENST00000375499 IFNA10P01566 189 aa11.52□□□□□ -0.57
SDHB-201ENST00000375499 IAPPP10997 89 aa11.52□□□□□ -0.57
SDHB-201ENST00000375499 SLC25A4P12235 298 aa11.52□□□□□ -0.57
SDHB-201ENST00000375499 RPL35AP18077 110 aaKnown RBP11.52□□□□□ -0.57
SDHB-201ENST00000375499 CRYBB3P26998 211 aa11.52□□□□□ -0.57
SDHB-201ENST00000375499 OR10J1P30954 320 aa11.52□□□□□ -0.57
SDHB-201ENST00000375499 WFDC3Q8IUB2 231 aa11.52□□□□□ -0.57
SDHB-201ENST00000375499 OR1S2Q8NGQ3 325 aa11.52□□□□□ -0.57
SDHB-201ENST00000375499 NPIPB3Q92617 1050 aa11.52□□□□□ -0.57
SDHB-201ENST00000375499 AGRNO00468 2067 aa11.51□□□□□ -0.57
SDHB-201ENST00000375499 NDUFB6O95139 128 aa11.51□□□□□ -0.57
SDHB-201ENST00000375499 HOXB5P09067 269 aa11.51□□□□□ -0.57
SDHB-201ENST00000375499 IL7P13232 177 aa11.51□□□□□ -0.57
SDHB-201ENST00000375499 USF2Q15853 346 aaPredicted RBP11.51□□□□□ -0.57
SDHB-201ENST00000375499 ACY3Q96HD9 319 aa11.51□□□□□ -0.57
SDHB-201ENST00000375499 MS4A6AQ9H2W1 248 aa11.51□□□□□ -0.57
SDHB-201ENST00000375499 U3KQ87 197 aa11.51□□□□□ -0.57
SDHB-201ENST00000375499 PLECQ15149 4684 aaKnown RBP11.51□□□□□ -0.57
SDHB-201ENST00000375499 TRAV30A0A087WSZ9 112 aa11.5□□□□□ -0.57
SDHB-201ENST00000375499 MPTX1A8MV57 137 aa11.5□□□□□ -0.57
SDHB-201ENST00000375499 NPPCP23582 126 aa11.5□□□□□ -0.57
SDHB-201ENST00000375499 P2RY1P47900 373 aa11.5□□□□□ -0.57
SDHB-201ENST00000375499 DEFB135Q30KP9 77 aa11.5□□□□□ -0.57
SDHB-201ENST00000375499 GGNBP1Q5YKI7 109 aa11.5□□□□□ -0.57
SDHB-201ENST00000375499 METTL26Q96S19 204 aa11.5□□□□□ -0.57
SDHB-201ENST00000375499 U3KQE9 123 aa11.5□□□□□ -0.57
SDHB-201ENST00000375499 IGKV1D-37A0A075B6S9 117 aa11.49□□□□□ -0.57
SDHB-201ENST00000375499 C9orf170A2RU37 121 aa11.49□□□□□ -0.57
SDHB-201ENST00000375499 NAP1L6A6NFF2 107 aa11.49□□□□□ -0.57
SDHB-201ENST00000375499 ADAP1O75689 374 aa11.49□□□□□ -0.57
SDHB-201ENST00000375499 SLC25A6P12236 298 aa11.49□□□□□ -0.57
SDHB-201ENST00000375499 ANXA7P20073 488 aaKnown RBP11.49□□□□□ -0.57
SDHB-201ENST00000375499 INPP1P49441 399 aa11.49□□□□□ -0.57
SDHB-201ENST00000375499 YPEL3P61236 119 aaPredicted RBP11.49□□□□□ -0.57
SDHB-201ENST00000375499 DHRS2Q13268 280 aa11.49□□□□□ -0.57
SDHB-201ENST00000375499 MAGT1Q9H0U3 335 aa11.49□□□□□ -0.57
SDHB-201ENST00000375499 CACFD1Q9UGQ2 172 aa11.49□□□□□ -0.57
SDHB-201ENST00000375499 TMED3Q9Y3Q3 217 aa11.49□□□□□ -0.57
SDHB-201ENST00000375499 PLA2G10O15496 165 aa11.48□□□□□ -0.57
SDHB-201ENST00000375499 TOMM40O96008 361 aa11.48□□□□□ -0.57
SDHB-201ENST00000375499 IFNA4P05014 189 aa11.48□□□□□ -0.57
SDHB-201ENST00000375499 IL4P05112 153 aa11.48□□□□□ -0.57
SDHB-201ENST00000375499 BMI1P35226 326 aa11.48□□□□□ -0.57
SDHB-201ENST00000375499 UBE2MP61081 183 aaKnown RBP11.48□□□□□ -0.57
SDHB-201ENST00000375499 EWSR1Q01844 656 aaKnown RBP eCLIP11.48□□□□□ -0.57
SDHB-201ENST00000375499 GAMTQ14353 236 aa11.48□□□□□ -0.57
SDHB-201ENST00000375499 LEMD1Q68G75 181 aa11.48□□□□□ -0.57
SDHB-201ENST00000375499 ETFRF1Q6IPR1 90 aa11.48□□□□□ -0.57
SDHB-201ENST00000375499 GLMPQ8WWB7 406 aa11.48□□□□□ -0.57
SDHB-201ENST00000375499 FAM90A26D6RGX4 464 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 PRSS46E5RG02 174 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 SCGB2A1O75556 95 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 HNRNPCP07910 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
SDHB-201ENST00000375499 OR4E1P0C645 316 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 PSG1P11464 419 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 APOC4P55056 127 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 DEFB131AP59861 70 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 RPL11P62913 178 aaKnown RBP11.47□□□□□ -0.57
SDHB-201ENST00000375499 ZNF90Q03938 601 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 NOXA1Q86UR1 476 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 STXBP6Q8NFX7 210 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 DCANP1Q8TF63 244 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 Q8WTZ3 238 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 TMEM231Q9H6L2 316 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 NDUFA13Q9P0J0 144 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 RABAC1Q9UI14 185 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 ALMS1Q8TCU4 4167 aa11.47□□□□□ -0.57
SDHB-201ENST00000375499 IGKV1OR2-108A0A075B7D4 117 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 KIR2DL5BA0A0G2JN68 375 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 KIR2DL5BA0A0G2JPC4 375 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 A0A1W2PS18 150 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 K7EQG2 157 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 DNASE2O00115 360 aaPredicted RBP11.46□□□□□ -0.57
SDHB-201ENST00000375499 WRBO00258 174 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 CD5P06127 495 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 C16orf54Q6UWD8 224 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 Q6ZWC4 215 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 LYG2Q86SG7 212 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 KIR2DL5AQ8N109 375 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 OR51G1Q8NGK1 321 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 KIR2DL5BQ8NHK3 375 aa11.46□□□□□ -0.57
SDHB-201ENST00000375499 PAIP2BQ9ULR5 123 aaKnown RBP11.46□□□□□ -0.57
SDHB-201ENST00000375499 TRAV2A0A0B4J234 112 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms