RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 HOXA4Q00056 320 aaPredicted RBP9.96□□□□□ -0.81
C9orf3-203ENST00000375315 CXorf67Q86X51 503 aaPredicted RBP9.96□□□□□ -0.81
C9orf3-203ENST00000375315 ZBTB34Q8NCN2 500 aa9.96□□□□□ -0.81
C9orf3-203ENST00000375315 MGST2Q99735 147 aa9.96□□□□□ -0.81
C9orf3-203ENST00000375315 PRDM14Q9GZV8 571 aa9.96□□□□□ -0.81
C9orf3-203ENST00000375315 THYN1Q9P016 225 aa9.96□□□□□ -0.81
C9orf3-203ENST00000375315 FAM120AOSQ5T036 256 aa9.96□□□□□ -0.82
C9orf3-203ENST00000375315 SEM1Q6ZVN7 128 aa9.96□□□□□ -0.82
C9orf3-203ENST00000375315 CHCHD1Q96BP2 118 aaKnown RBP9.96□□□□□ -0.82
C9orf3-203ENST00000375315 EFNB3Q15768 340 aa9.96□□□□□ -0.82
C9orf3-203ENST00000375315 BHLHA15Q7RTS1 189 aaPredicted RBP9.96□□□□□ -0.82
C9orf3-203ENST00000375315 FAM216AQ8WUB2 273 aa9.96□□□□□ -0.82
C9orf3-203ENST00000375315 TMEM167BQ9NRX6 74 aa9.96□□□□□ -0.82
C9orf3-203ENST00000375315 KCNIP1Q9NZI2 227 aa9.96□□□□□ -0.82
C9orf3-203ENST00000375315 TRAPPC2LQ9UL33 140 aa9.96□□□□□ -0.82
C9orf3-203ENST00000375315 TRAV24A0A0B4J272 114 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 J3QR89 54 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 F2RL2O00254 374 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 OR5AL1P0C617 328 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 KRTAP27-1Q3LI81 207 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 C2orf91Q6ZV80 131 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 PROCRQ9UNN8 238 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 TRAV26-1A0A087WT03 109 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 SH2D7A6NKC9 451 aaPredicted RBP9.95□□□□□ -0.82
C9orf3-203ENST00000375315 CA1P00915 261 aaPredicted RBP9.95□□□□□ -0.82
C9orf3-203ENST00000375315 CRYBA4P53673 196 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 FAM27E3Q08E93 113 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 CD300EQ496F6 205 aaPredicted RBP9.95□□□□□ -0.82
C9orf3-203ENST00000375315 SSMEM1Q8WWF3 244 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 MS4A5Q9H3V2 200 aa9.95□□□□□ -0.82
C9orf3-203ENST00000375315 ESPL1Q14674 2120 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 IGHV1-24A0A0C4DH33 117 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 ZNF207O43670 478 aaKnown RBP9.94□□□□□ -0.82
C9orf3-203ENST00000375315 LIPFP07098 398 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 SPATA31B1PQ5VZV4 182 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 SLC35E4Q6ICL7 350 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 FA2HQ7L5A8 372 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 ZNF645Q8N7E2 425 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 Q8NA96 180 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 FAM215AQ9Y5M1 114 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.94□□□□□ -0.82
C9orf3-203ENST00000375315 FOXH1O75593 365 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 CEACAM21Q3KPI0 293 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 IGFL3Q6UXB1 125 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 LINC00173Q6ZV60 143 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 UBALD1Q8TB05 177 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 PERPQ96FX8 193 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 ZNF488Q96MN9 340 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 SSBP3Q9BWW4 388 aaPredicted RBP9.94□□□□□ -0.82
C9orf3-203ENST00000375315 LINC00470Q9BZP3 86 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 GCM1Q9NP62 436 aa9.94□□□□□ -0.82
C9orf3-203ENST00000375315 TRGV8A0A0C4DH27 118 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 TEX48A0A1B0GUV7 120 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 GAGE12HA6NDE8 117 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 FABP2P12104 132 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 CA6P23280 308 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 PPOXP50336 477 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 KIR3DS1Q14943 382 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 PSG5Q15238 335 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 GDF5OSQ5U4N7 250 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 SSX8Q7RTT4 187 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 STXBP6Q8NFX7 210 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 H1FXQ92522 213 aaKnown RBP9.93□□□□□ -0.82
C9orf3-203ENST00000375315 NAA38Q9BRA0 125 aaKnown RBP9.93□□□□□ -0.82
C9orf3-203ENST00000375315 HSPB8Q9UJY1 196 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 ITPR1Q14643 2758 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 A0A1W2PPM0 123 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 SYNGR1O43759 233 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 CAMPP49913 170 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 TMPRSS3P57727 454 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 TPRX1Q8N7U7 411 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 URB1-AS1Q96HZ7 61 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 PLEKHA3Q9HB20 300 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 DUSP13Q9UII6 198 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 PRRG2O14669 202 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 ZNF808Q8N4W9 903 aaPredicted RBP9.93□□□□□ -0.82
C9orf3-203ENST00000375315 NUP35Q8NFH5 326 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 GRAMD2BQ96HH9 432 aa9.93□□□□□ -0.82
C9orf3-203ENST00000375315 SLC25A10Q9UBX3 287 aaPredicted RBP9.93□□□□□ -0.82
C9orf3-203ENST00000375315 TMEM189A5PLL7 270 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 H0Y8G0 127 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 SS18L1O75177 396 aaPredicted RBP9.92□□□□□ -0.82
C9orf3-203ENST00000375315 IGLV2-8P01709 118 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 RPL30P62888 115 aaKnown RBP9.92□□□□□ -0.82
C9orf3-203ENST00000375315 MEF2CQ06413 473 aaPredicted RBP9.92□□□□□ -0.82
C9orf3-203ENST00000375315 TCTEX1D4Q5JR98 221 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 C5orf30Q96GV9 206 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 POM121L2Q96KW2 1035 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 FGF23Q9GZV9 251 aaPredicted RBP9.92□□□□□ -0.82
C9orf3-203ENST00000375315 ZNF257Q9Y2Q1 563 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 TSSC4Q9Y5U2 329 aaPredicted RBP9.92□□□□□ -0.82
C9orf3-203ENST00000375315 A0A1W2PRE2 83 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 M0R1B8 84 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 SNAI2O43623 268 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 Q6ZT83 130 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 ATP5L2Q7Z4Y8 100 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 MTURNQ8N3F0 131 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 STPG3Q8N7X2 389 aa9.92□□□□□ -0.82
C9orf3-203ENST00000375315 HEYLQ9NQ87 328 aaPredicted RBP9.92□□□□□ -0.82
C9orf3-203ENST00000375315 ZNF355PQ9NSJ1 428 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms