RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 GFRALQ6UXV0 394 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 OR5B3Q8NH48 314 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 C22orf15Q8WYQ4 148 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 RPH3ALQ9UNE2 315 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 SH2D7A6NKC9 451 aaPredicted RBP9□□□□□ -0.97
CCDC40-203ENST00000374877 PLAUP00749 431 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 CD69Q07108 199 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 MSMPQ1L6U9 139 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 MBNL2Q5VZF2 373 aaKnown RBP9□□□□□ -0.97
CCDC40-203ENST00000374877 OR4C5Q8NGB2 326 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 GRAMD2BQ96HH9 432 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 FAM167A-AS1Q96KT0 104 aa9□□□□□ -0.97
CCDC40-203ENST00000374877 M0QZ24 198 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 CORTO00230 105 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 PEX7O00628 323 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 RNASE2P10153 161 aaKnown RBP8.99□□□□□ -0.97
CCDC40-203ENST00000374877 GNG5P63218 68 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 VAMP3Q15836 100 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-203ENST00000374877 OR8B3Q8NGG8 313 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 ALKBH7Q9BT30 221 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-203ENST00000374877 PAXXQ9BUH6 204 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 RP1L1Q8IWN7 2480 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-203ENST00000374877 FOXA3P55318 350 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-203ENST00000374877 RBX1P62877 108 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 SSBP2P81877 361 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-203ENST00000374877 RNF151Q2KHN1 245 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 C2orf83Q53S99 150 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 WIPF2Q8TF74 440 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-203ENST00000374877 MRPL32Q9BYC8 188 aaKnown RBP8.99□□□□□ -0.97
CCDC40-203ENST00000374877 ZNF257Q9Y2Q1 563 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 DSCAMO60469 2012 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 CEP295Q9C0D2 2601 aa8.99□□□□□ -0.97
CCDC40-203ENST00000374877 SAA1P0DJI8 122 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-203ENST00000374877 TNFSF4P23510 183 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 FBLN7Q53RD9 439 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 RASL11AQ6T310 242 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 SPATA12Q7Z6I5 190 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 ITLN1Q8WWA0 313 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 MBD6Q96DN6 1003 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 PTPRQQ9UMZ3 2332 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 DCHS1Q96JQ0 3298 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 LOC400499M0QZD8 3231 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 IGHV1-69-2A0A0G2JMI3 117 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 IGLC7A0M8Q6 106 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 C2orf70A6NJV1 201 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 TOMM40O96008 361 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 CD24P25063 80 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 POU2AF1Q16633 256 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 OR4F17Q8NGA8 305 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 RAB9BQ9NP90 201 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 H0YJW9 148 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 CT45A6P0DMU7 189 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 CT45A5P0DMU8 189 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 CT45A7P0DMV0 189 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 CGB3P0DN86 165 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 CGB7P0DN87 165 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 C10orf113Q5VZT2 155 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 TCF24Q7RTU0 167 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 ZNF329Q86UD4 541 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 PNKDQ8N490 385 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 ZNF596Q8TC21 504 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 TMEM70Q9BUB7 260 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 GAL3ST2Q9H3Q3 398 aa8.98□□□□□ -0.97
CCDC40-203ENST00000374877 OR4C46A6NHA9 309 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 ITGB1BP1O14713 200 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 HIST1H1EP10412 219 aaKnown RBP8.97□□□□□ -0.97
CCDC40-203ENST00000374877 BLNKQ8WV28 456 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 NAV3Q8IVL0 2385 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 CACNA1AO00555 2505 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 LOC105371242A0A075B767 164 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 CA7P43166 264 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 KLF5Q13887 457 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-203ENST00000374877 PRR30Q53SZ7 412 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-203ENST00000374877 FAM231DQ6ZW35 169 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 MUC15Q8N387 334 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 OR1L8Q8NGR8 309 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 IGLV1-44P01699 117 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 ERHP84090 104 aaKnown RBP8.97□□□□□ -0.97
CCDC40-203ENST00000374877 MPV17L2Q567V2 206 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 LHFPL4Q7Z7J7 247 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 NPIPB3Q92617 1050 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 HARBI1Q96MB7 349 aa8.97□□□□□ -0.97
CCDC40-203ENST00000374877 PLCE1Q9P212 2302 aa8.96□□□□□ -0.97
CCDC40-203ENST00000374877 VWC2LB2RUY7 222 aa8.96□□□□□ -0.97
CCDC40-203ENST00000374877 SLC25A5P05141 298 aaKnown RBP8.96□□□□□ -0.97
CCDC40-203ENST00000374877 CCL13Q99616 98 aa8.96□□□□□ -0.97
CCDC40-203ENST00000374877 WASHC3Q9Y3C0 194 aa8.96□□□□□ -0.97
CCDC40-203ENST00000374877 TIMM8BQ9Y5J9 83 aaPredicted RBP8.96□□□□□ -0.97
CCDC40-203ENST00000374877 hDV102S1A0JD36 115 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 PSMB11A5LHX3 300 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 H0Y8G0 127 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 M0R1B8 84 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 FAM216BQ8N7L0 139 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 FAM169BQ8N8A8 192 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 CHRDL1Q9BU40 450 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 CACNA1GO43497 2377 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 SPTBN4Q9H254 2564 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 OR2J3O76001 311 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 REG1BP48304 166 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms