RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ACTR3CQ9C0K3 210 aaPredicted RBP12.28□□□□□ -0.44
NIPAL3-204ENST00000374399 MAP1LC3BQ9GZQ8 125 aa12.28□□□□□ -0.44
NIPAL3-204ENST00000374399 SEPSECSQ9HD40 501 aaKnown RBP12.28□□□□□ -0.44
NIPAL3-204ENST00000374399 KCNIP2Q9NS61 270 aa12.28□□□□□ -0.44
NIPAL3-204ENST00000374399 TNFRSF19Q9NS68 423 aa12.28□□□□□ -0.44
NIPAL3-204ENST00000374399 ZFP92A6NM28 416 aa12.27□□□□□ -0.45
NIPAL3-204ENST00000374399 OR2J3O76001 311 aa12.27□□□□□ -0.45
NIPAL3-204ENST00000374399 IGKV1-17P01599 117 aa12.27□□□□□ -0.45
NIPAL3-204ENST00000374399 TMEM37Q8WXS4 190 aa12.27□□□□□ -0.45
NIPAL3-204ENST00000374399 VPREB3Q9UKI3 123 aa12.27□□□□□ -0.45
NIPAL3-204ENST00000374399 BTBD17A6NE02 478 aa12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 CYB5BO43169 146 aa12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 HOXA3O43365 443 aaPredicted RBP12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 CLN5O75503 358 aa12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 CDC34P49427 236 aaPredicted RBP12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 GUK1Q16774 197 aa12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 C9orf152Q5JTZ5 239 aa12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 PATE2Q6UY27 113 aa12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 NOL4LQ96MY1 436 aaPredicted RBP12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 RARRES2Q99969 163 aa12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 TMPRSS5Q9H3S3 457 aa12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 CUBNO60494 3623 aa12.26□□□□□ -0.45
NIPAL3-204ENST00000374399 TRAV41A0A0B4J266 112 aa12.25□□□□□ -0.45
NIPAL3-204ENST00000374399 HBE1P02100 147 aa12.25□□□□□ -0.45
NIPAL3-204ENST00000374399 PPIFP30405 207 aaKnown RBP12.25□□□□□ -0.45
NIPAL3-204ENST00000374399 SPNS3Q6ZMD2 512 aa12.25□□□□□ -0.45
NIPAL3-204ENST00000374399 SLC35E3Q7Z769 313 aa12.25□□□□□ -0.45
NIPAL3-204ENST00000374399 SIGLECL1Q8N7X8 197 aa12.25□□□□□ -0.45
NIPAL3-204ENST00000374399 ZNF414Q96IQ9 312 aa12.25□□□□□ -0.45
NIPAL3-204ENST00000374399 ADCYAP1P18509 176 aa12.25□□□□□ -0.45
NIPAL3-204ENST00000374399 TIGITQ495A1 244 aa12.25□□□□□ -0.45
NIPAL3-204ENST00000374399 SMR3AQ99954 134 aa12.25□□□□□ -0.45
NIPAL3-204ENST00000374399 FBXL7Q9UJT9 491 aa12.25□□□□□ -0.45
NIPAL3-204ENST00000374399 TSPAN9O75954 239 aa12.24□□□□□ -0.45
NIPAL3-204ENST00000374399 OR5G3P0C626 314 aa12.24□□□□□ -0.45
NIPAL3-204ENST00000374399 STAG3L2P0CL84 134 aa12.24□□□□□ -0.45
NIPAL3-204ENST00000374399 STAG3L3P0CL85 134 aa12.24□□□□□ -0.45
NIPAL3-204ENST00000374399 SELENOTP62341 195 aa12.24□□□□□ -0.45
NIPAL3-204ENST00000374399 CFHR3Q02985 330 aa12.24□□□□□ -0.45
NIPAL3-204ENST00000374399 PMS2P11Q13670 270 aa12.24□□□□□ -0.45
NIPAL3-204ENST00000374399 MORN5Q5VZ52 161 aa12.24□□□□□ -0.45
NIPAL3-204ENST00000374399 MIR17HGQ75NE6 70 aa12.24□□□□□ -0.45
NIPAL3-204ENST00000374399 YAE1D1Q9NRH1 226 aa12.24□□□□□ -0.45
NIPAL3-204ENST00000374399 TMEM218A2RU14 115 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 IGHV3-23P01764 117 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 HIST1H1BP16401 226 aaKnown RBP12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 ZP3P21754 424 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 RHOGP84095 191 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 ICAM4Q14773 271 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 TMEM95Q3KNT9 176 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 A0A1W2PPV4 95 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 RBFOX3A6NFN3 312 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 PSG1P11464 419 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 FCGR2BP31994 310 aaPredicted RBP12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 HAGHQ16775 308 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 FAM78BQ5VT40 261 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 TEX29Q8N6K0 151 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 ZNF502Q8TBZ5 544 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 VN1R17PQ8TDU5 208 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 GATAD1Q8WUU5 269 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 ZNF503Q96F45 646 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 C21orf62Q9NYP8 219 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 THYN1Q9P016 225 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 ZNF580Q9UK33 172 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 FUT9Q9Y231 359 aa12.23□□□□□ -0.45
NIPAL3-204ENST00000374399 LOC102723971A0A1B0GUV8 181 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 BRI3O95415 125 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 MFAP4P55083 255 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 PLP1P60201 277 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 RHOBP62745 196 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 C15orf32Q32M92 178 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 ZNF506Q5JVG8 444 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 MS4A10Q96PG2 267 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 DNAJC4Q9NNZ3 241 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 TREM1Q9NP99 234 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 DOK5Q9P104 306 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 GNG13Q9P2W3 67 aa12.22□□□□□ -0.45
NIPAL3-204ENST00000374399 AP4M1O00189 453 aa12.21□□□□□ -0.45
NIPAL3-204ENST00000374399 CTSGP08311 255 aa12.21□□□□□ -0.45
NIPAL3-204ENST00000374399 ARL14EPLP0DKL9 152 aa12.21□□□□□ -0.45
NIPAL3-204ENST00000374399 NECAP1Q8NC96 275 aa12.21□□□□□ -0.45
NIPAL3-204ENST00000374399 FAM167A-AS1Q96KT0 104 aa12.21□□□□□ -0.45
NIPAL3-204ENST00000374399 CCDC140Q96MF4 163 aa12.21□□□□□ -0.45
NIPAL3-204ENST00000374399 DUX5Q96PT3 197 aa12.21□□□□□ -0.45
NIPAL3-204ENST00000374399 UHRF2Q96PU4 802 aa12.21□□□□□ -0.45
NIPAL3-204ENST00000374399 C19orf24Q9BVV8 132 aa12.21□□□□□ -0.45
NIPAL3-204ENST00000374399 EIF5A2Q9GZV4 153 aaKnown RBP12.21□□□□□ -0.45
NIPAL3-204ENST00000374399 KRBOX1C9JBD0 128 aa12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 IGLV1-40P01703 118 aa12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 BCL2P10415 239 aa12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 ADMP35318 185 aa12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 NPBWR1P48145 328 aa12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 C10orf91Q5T1B1 145 aa12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 ZNF702PQ9H963 129 aa12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 ZNF355PQ9NSJ1 428 aa12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 MTORP42345 2549 aa12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 TRAV5A0A0B4J249 113 aa12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 TOMM40O96008 361 aa12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 SRP14P37108 136 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-204ENST00000374399 NARS2Q96I59 477 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms