RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 IL36BQ9NZH7 164 aa14.97□□□□□ -0.01
USP49-202ENST00000373010 CHD8Q9HCK8 2581 aa14.97□□□□□ -0.01
USP49-202ENST00000373010 COA6Q5JTJ3 125 aaKnown RBP14.97□□□□□ -0.01
USP49-202ENST00000373010 ETFRF1Q6IPR1 90 aa14.97□□□□□ -0.01
USP49-202ENST00000373010 TIMM23O14925 209 aa14.96□□□□□ -0.01
USP49-202ENST00000373010 AMBPP02760 352 aa14.96□□□□□ -0.01
USP49-202ENST00000373010 ORM2P19652 201 aa14.96□□□□□ -0.01
USP49-202ENST00000373010 LY6DQ14210 128 aa14.96□□□□□ -0.01
USP49-202ENST00000373010 LINC00305Q7Z4B0 112 aa14.96□□□□□ -0.01
USP49-202ENST00000373010 TIMD4Q96H15 378 aa14.96□□□□□ -0.01
USP49-202ENST00000373010 GSX1Q9H4S2 264 aaPredicted RBP14.96□□□□□ -0.01
USP49-202ENST00000373010 RD3LP0DJH9 198 aa14.96□□□□□ -0.01
USP49-202ENST00000373010 KLRD1Q13241 179 aa14.96□□□□□ -0.01
USP49-202ENST00000373010 BTF3L4Q96K17 158 aa14.96□□□□□ -0.01
USP49-202ENST00000373010 DMRT1Q9Y5R6 373 aa14.96□□□□□ -0.01
USP49-202ENST00000373010 V9GYV3 84 aa14.96□□□□□ -0.01
USP49-202ENST00000373010 NCOR2Q9Y618 2525 aa14.96□□□□□ -0.02
USP49-202ENST00000373010 PLGLAQ15195 96 aa14.95□□□□□ -0.02
USP49-202ENST00000373010 OR1B1Q8NGR6 318 aa14.95□□□□□ -0.02
USP49-202ENST00000373010 LINC00479Q96M42 142 aa14.95□□□□□ -0.02
USP49-202ENST00000373010 RNASE7Q9H1E1 156 aaKnown RBP14.95□□□□□ -0.02
USP49-202ENST00000373010 HILPDAQ9Y5L2 63 aa14.95□□□□□ -0.02
USP49-202ENST00000373010 CNN1P51911 297 aaKnown RBP14.95□□□□□ -0.02
USP49-202ENST00000373010 TIGITQ495A1 244 aa14.95□□□□□ -0.02
USP49-202ENST00000373010 TPTE2P1Q5T6R2 138 aa14.95□□□□□ -0.02
USP49-202ENST00000373010 SRSF12Q8WXF0 261 aaKnown RBP14.95□□□□□ -0.02
USP49-202ENST00000373010 FXYD5Q96DB9 178 aa14.95□□□□□ -0.02
USP49-202ENST00000373010 F11RQ9Y624 299 aaKnown RBP14.95□□□□□ -0.02
USP49-202ENST00000373010 SPTBN1Q01082 2364 aaKnown RBP14.95□□□□□ -0.02
USP49-202ENST00000373010 ABCA1O95477 2261 aa14.95□□□□□ -0.02
USP49-202ENST00000373010 A0A1W2PRD5 423 aa14.94□□□□□ -0.02
USP49-202ENST00000373010 A0A1W2PRF3 423 aa14.94□□□□□ -0.02
USP49-202ENST00000373010 A0A1W2PRM7 423 aa14.94□□□□□ -0.02
USP49-202ENST00000373010 IGLV2-8P01709 118 aa14.94□□□□□ -0.02
USP49-202ENST00000373010 PDLIM4P50479 330 aa14.94□□□□□ -0.02
USP49-202ENST00000373010 IGF2BP2-AS1Q96M15 143 aa14.94□□□□□ -0.02
USP49-202ENST00000373010 FXYD3Q14802 87 aa14.94□□□□□ -0.02
USP49-202ENST00000373010 NHLRC2Q8NBF2 726 aa14.94□□□□□ -0.02
USP49-202ENST00000373010 TMEM116Q8NCL8 245 aa14.94□□□□□ -0.02
USP49-202ENST00000373010 C22orf15Q8WYQ4 148 aa14.94□□□□□ -0.02
USP49-202ENST00000373010 TRGV9Q99603 122 aa14.94□□□□□ -0.02
USP49-202ENST00000373010 FRMD6-AS1P0C7T7 363 aa14.93□□□□□ -0.02
USP49-202ENST00000373010 MGST1P10620 155 aaKnown RBP14.93□□□□□ -0.02
USP49-202ENST00000373010 CD24P25063 80 aa14.93□□□□□ -0.02
USP49-202ENST00000373010 HTR1DP28221 377 aa14.93□□□□□ -0.02
USP49-202ENST00000373010 RPEL1Q2QD12 228 aa14.93□□□□□ -0.02
USP49-202ENST00000373010 ZNF329Q86UD4 541 aa14.93□□□□□ -0.02
USP49-202ENST00000373010 A0A1B0GUS0 222 aa14.93□□□□□ -0.02
USP49-202ENST00000373010 A0A1W2PPR1 153 aa14.93□□□□□ -0.02
USP49-202ENST00000373010 CBLN1P23435 193 aa14.93□□□□□ -0.02
USP49-202ENST00000373010 ADMP35318 185 aa14.93□□□□□ -0.02
USP49-202ENST00000373010 CTAG1AP78358 180 aa14.93□□□□□ -0.02
USP49-202ENST00000373010 SSBP3Q9BWW4 388 aaPredicted RBP14.93□□□□□ -0.02
USP49-202ENST00000373010 LOC105371242A0A075B767 164 aa14.92□□□□□ -0.02
USP49-202ENST00000373010 GCGP01275 180 aa14.92□□□□□ -0.02
USP49-202ENST00000373010 MMDQ15546 238 aa14.92□□□□□ -0.02
USP49-202ENST00000373010 ASPHD1Q5U4P2 390 aa14.92□□□□□ -0.02
USP49-202ENST00000373010 NEU4Q8WWR8 484 aaPredicted RBP14.92□□□□□ -0.02
USP49-202ENST00000373010 DPM3Q9P2X0 92 aa14.92□□□□□ -0.02
USP49-202ENST00000373010 HIVEP3Q5T1R4 2406 aa14.92□□□□□ -0.02
USP49-202ENST00000373010 YPEL3P61236 119 aaPredicted RBP14.92□□□□□ -0.02
USP49-202ENST00000373010 OR8I2Q8N0Y5 310 aa14.92□□□□□ -0.02
USP49-202ENST00000373010 OR11H6Q8NGC7 330 aa14.92□□□□□ -0.02
USP49-202ENST00000373010 PERPQ96FX8 193 aa14.92□□□□□ -0.02
USP49-202ENST00000373010 TRAV34A0A0B4J273 112 aa14.91□□□□□ -0.02
USP49-202ENST00000373010 CNIH1O95406 144 aa14.91□□□□□ -0.02
USP49-202ENST00000373010 FBLN7Q53RD9 439 aa14.91□□□□□ -0.02
USP49-202ENST00000373010 OR1L6Q8NGR2 347 aa14.91□□□□□ -0.02
USP49-202ENST00000373010 BLNKQ8WV28 456 aa14.91□□□□□ -0.02
USP49-202ENST00000373010 RNF5Q99942 180 aa14.91□□□□□ -0.02
USP49-202ENST00000373010 CORTO00230 105 aa14.91□□□□□ -0.02
USP49-202ENST00000373010 RANP62826 216 aaKnown RBP14.91□□□□□ -0.02
USP49-202ENST00000373010 CFHR4Q92496 578 aa14.91□□□□□ -0.02
USP49-202ENST00000373010 OSTCQ9NRP0 149 aa14.91□□□□□ -0.02
USP49-202ENST00000373010 TRAV9-1A0A075B6T8 112 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 CDKN1AP38936 164 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 GNG5P63218 68 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 LEMD1Q68G75 181 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 WNT10AQ9GZT5 417 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 PEX7O00628 323 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 SPINK4O60575 86 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 NDUFS7O75251 213 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 HYPMO75409 117 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 HIST1H1BP16401 226 aaKnown RBP14.9□□□□□ -0.02
USP49-202ENST00000373010 IER3P46695 156 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 PRDM13Q9H4Q3 707 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 CDC42EP3Q9UKI2 254 aa14.9□□□□□ -0.02
USP49-202ENST00000373010 TCL1AP56279 114 aa14.89□□□□□ -0.03
USP49-202ENST00000373010 TMEM256Q8N2U0 113 aa14.89□□□□□ -0.03
USP49-202ENST00000373010 I3L2K1 104 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 M0R1W7 72 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 ISLRO14498 428 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 PAX2Q02962 417 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 IBA57Q5T440 356 aaKnown RBP14.88□□□□□ -0.03
USP49-202ENST00000373010 DTX2Q86UW9 622 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 FAM103A1Q9BTL3 118 aaKnown RBP14.88□□□□□ -0.03
USP49-202ENST00000373010 MRPL18Q9H0U6 180 aaKnown RBP14.88□□□□□ -0.03
USP49-202ENST00000373010 GRIFINA4D1Z8 144 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 ODF3BA8MYP8 253 aa14.88□□□□□ -0.03
USP49-202ENST00000373010 H3BTX0 84 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms