RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CX3CL1P78423 397 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 TMEM267Q0VDI3 215 aaPredicted RBP6.91□□□□□ -1.3
SNX27-201ENST00000368838 PJVKQ0ZLH3 352 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 RAB31Q13636 194 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 TEPPQ6URK8 271 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 BTNL8Q6UX41 500 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 C11orf44Q8N8P7 122 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 THAP8Q8NA92 274 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 HSD17B11Q8NBQ5 300 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 OR5R1Q8NH85 324 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 C17orf50Q8WW18 174 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 TPSG1Q9NRR2 321 aa6.91□□□□□ -1.3
SNX27-201ENST00000368838 IGHV7-81A0A0B4J1V7 117 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 A6NDX4 124 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 MFSD2BA6NFX1 497 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 SEC14L6B5MCN3 397 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 HBE1P02100 147 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 PRB2P02812 416 aaPredicted RBP6.9□□□□□ -1.3
SNX27-201ENST00000368838 IGF1P05019 195 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 OR13C7P0DN81 318 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 HIST1H1BP16401 226 aaKnown RBP6.9□□□□□ -1.3
SNX27-201ENST00000368838 CNTFRP26992 372 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 CAMLGP49069 296 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 SELENOTP62341 195 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 FXYD3Q14802 87 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 KIR3DS1Q14943 382 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 TNXAQ16473 311 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 LY6EQ16553 131 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 AKIRIN2Q53H80 203 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 OR8G2PQ6IF36 304 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 OR10W1Q8NGF6 305 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 TMEM190Q8WZ59 177 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 ARPC1AQ92747 370 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 NPCDR1Q9BY65 106 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 MOB4Q9Y3A3 225 aa6.9□□□□□ -1.3
SNX27-201ENST00000368838 NOTCH3Q9UM47 2321 aa6.9□□□□□ -1.31
SNX27-201ENST00000368838 TEX46H3BTG2 121 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 H3BUA1 57 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 FCN1O00602 326 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 ATP6V1G1O75348 118 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 IGHG2P01859 326 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 TAGLN2P37802 199 aaKnown RBP6.89□□□□□ -1.31
SNX27-201ENST00000368838 PLP1P60201 277 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 GAMTQ14353 236 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 HES1Q14469 280 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 TMEM41BQ5BJD5 291 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 C19orf54Q5BKX5 351 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 AKR1C8PQ5T2L2 129 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 SLC25A24Q6NUK1 477 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 C5orf56Q8N8D9 126 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 ZNF709Q8N972 641 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 MARC2Q969Z3 335 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 RBMXL1Q96E39 390 aaKnown RBP6.89□□□□□ -1.31
SNX27-201ENST00000368838 SLC35E1Q96K37 410 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 TXN2Q99757 166 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 RASL11BQ9BPW5 248 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 THYN1Q9P016 225 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 VPREB3Q9UKI3 123 aa6.89□□□□□ -1.31
SNX27-201ENST00000368838 IGLV11-55A0A075B6I3 123 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 ZNF705EA8MWA4 302 aaPredicted RBP6.88□□□□□ -1.31
SNX27-201ENST00000368838 H3BUX3 64 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 I3L2K1 104 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 AMY1AP04745 511 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 EGR2P11161 476 aaPredicted RBP6.88□□□□□ -1.31
SNX27-201ENST00000368838 MYOD1P15172 320 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 M6PRP20645 277 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 PLGLAQ15195 96 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 FAM74A1Q5RGS3 127 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 C10orf55Q5SWW7 151 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 ASPHD1Q5U4P2 390 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 SLC16A13Q7RTY0 426 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 OR4X1Q8NH49 305 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 SUN5Q8TC36 379 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 TRGV9Q99603 122 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 SSX3Q99909 188 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 GGTLC1Q9BX51 225 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 HINT2Q9BX68 163 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 SH3BGRL3Q9H299 93 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 FNDC4Q9H6D8 234 aaPredicted RBP6.88□□□□□ -1.31
SNX27-201ENST00000368838 RPRMQ9NS64 109 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 GAR1Q9NY12 217 aaKnown RBP6.88□□□□□ -1.31
SNX27-201ENST00000368838 SLC45A2Q9UMX9 530 aa6.88□□□□□ -1.31
SNX27-201ENST00000368838 TRAV30A0A087WSZ9 112 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 TRBV9A0A0B4J1U6 114 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 UBE2L5PA0A1B0GUS4 154 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 KRBOX1C9JBD0 128 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 G3V4G9 280 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 CNIH1O95406 144 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 CD5P06127 495 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 AREGP15514 252 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 FGF7P21781 194 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 MFAP2P55001 183 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 RAB2AP61019 212 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 RPL15P61313 204 aaKnown RBP6.87□□□□□ -1.31
SNX27-201ENST00000368838 RUNX1Q01196 453 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 ACOT6Q3I5F7 207 aaPredicted RBP6.87□□□□□ -1.31
SNX27-201ENST00000368838 SPINK9Q5DT21 86 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 FAM209BQ5JX69 171 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 SPSB3Q6PJ21 355 aa6.87□□□□□ -1.31
SNX27-201ENST00000368838 Q6ZRG5 221 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms