RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 ZCCHC24Q8N2G6 241 aaKnown RBP11.04□□□□□ -0.64
PTPRK-204ENST00000368210 MDS2Q8NDY4 140 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 METTL26Q96S19 204 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 TMEM189A5PLL7 270 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 IGFBP2P18065 325 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 TMEM177Q53S58 311 aa11.04□□□□□ -0.64
PTPRK-204ENST00000368210 HELZP42694 1942 aaKnown RBP11.04□□□□□ -0.64
PTPRK-204ENST00000368210 SPANXN1Q5VSR9 72 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 SGK494Q96LW2 274 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 FBXL15Q9H469 300 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 FANCMQ8IYD8 2048 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 TRAV1-1A0A0B4J248 108 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 RAMP3O60896 148 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 AZU1P20160 251 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 ATP5J2P56134 94 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 RPS20P60866 119 aaKnown RBP11.03□□□□□ -0.64
PTPRK-204ENST00000368210 RNASE8Q8TDE3 154 aaKnown RBP11.03□□□□□ -0.64
PTPRK-204ENST00000368210 TICRRQ7Z2Z1 1910 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 C3orf79P0CE67 100 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 CD300EQ496F6 205 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-204ENST00000368210 SSBP3Q9BWW4 388 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-204ENST00000368210 TANC1Q9C0D5 1861 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 SAA2-SAA4A0A096LPE2 208 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 TRAV5A0A0B4J249 113 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 SAA2P0DJI9 122 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-204ENST00000368210 SRSF7Q16629 238 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTPRK-204ENST00000368210 ADAMTSL5Q6ZMM2 481 aa11.03□□□□□ -0.64
PTPRK-204ENST00000368210 TSSC4Q9Y5U2 329 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-204ENST00000368210 NAPSAO96009 420 aa11.02□□□□□ -0.64
PTPRK-204ENST00000368210 FOXL2NBQ6ZUU3 175 aa11.02□□□□□ -0.64
PTPRK-204ENST00000368210 LINC00305Q7Z4B0 112 aa11.02□□□□□ -0.64
PTPRK-204ENST00000368210 CREBBPQ92793 2442 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 ABCA4P78363 2273 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 PLXNA2O75051 1894 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 FOXH1O75593 365 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 COX6B1P14854 86 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 HTN1P15515 57 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 PIMREGQ9BSJ6 248 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 TRAV8-4A0A0B4J246 113 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 ETV2O00321 342 aaPredicted RBP11.02□□□□□ -0.65
PTPRK-204ENST00000368210 APOHP02749 345 aaPredicted RBP11.02□□□□□ -0.65
PTPRK-204ENST00000368210 C1QTNF9P0C862 333 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 IGLC2P0DOY2 106 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 IGLC3P0DOY3 106 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 SSBP2P81877 361 aaPredicted RBP11.02□□□□□ -0.65
PTPRK-204ENST00000368210 RBPMS2Q6ZRY4 209 aaKnown RBP11.02□□□□□ -0.65
PTPRK-204ENST00000368210 C16orf92Q96LL3 132 aa11.02□□□□□ -0.65
PTPRK-204ENST00000368210 CGAP01215 116 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 ID1P41134 155 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 PSG9Q00887 426 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 NAA38Q9BRA0 125 aaKnown RBP11.01□□□□□ -0.65
PTPRK-204ENST00000368210 FRMPD3Q5JV73 1810 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 CADP27708 2225 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 SRRM5B3KS81 715 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 NEU4Q8WWR8 484 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-204ENST00000368210 CACNG8Q8WXS5 425 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 IGHV3-35A0A0C4DH35 117 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-204ENST00000368210 GPX1P07203 203 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 TIMP3P35625 211 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 MST1LQ2TV78 715 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
PTPRK-204ENST00000368210 A0A1W2PS18 150 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 GAGE12HA6NDE8 117 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 PSPNO60542 156 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 MMP23AO75900 390 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 DUTP33316 252 aaKnown RBP11.01□□□□□ -0.65
PTPRK-204ENST00000368210 PDLIM4P50479 330 aa11.01□□□□□ -0.65
PTPRK-204ENST00000368210 FAM181BA6NEQ2 426 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 WISP1O95388 367 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 CD55P08174 381 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 TBR1Q16650 682 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 RNASE6Q93091 150 aaKnown RBP11□□□□□ -0.65
PTPRK-204ENST00000368210 SPAG8Q99932 426 aaPredicted RBP11□□□□□ -0.65
PTPRK-204ENST00000368210 ABCA1O95477 2261 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 MGPP08493 103 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 SAA1P0DJI8 122 aaPredicted RBP11□□□□□ -0.65
PTPRK-204ENST00000368210 BDP1A6H8Y1 2624 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 NBEAP1P0C6P0 100 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 KIR3DS1Q14943 382 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 GOLT1AQ6ZVE7 132 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 UPK2O00526 184 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 IGHV1-46P01743 117 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 OR9G9P0C7N8 305 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 CD33P20138 364 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 GAGE5Q13069 117 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 GAGE6Q13070 117 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 PSG3Q16557 428 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 SRSF12Q8WXF0 261 aaKnown RBP11□□□□□ -0.65
PTPRK-204ENST00000368210 ZNF524Q96C55 264 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 WFDC1Q9HC57 220 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 TMEM160Q9NX00 188 aa11□□□□□ -0.65
PTPRK-204ENST00000368210 USF3Q68DE3 2245 aa10.99□□□□□ -0.65
PTPRK-204ENST00000368210 A0A087X0K7 114 aa10.99□□□□□ -0.65
PTPRK-204ENST00000368210 LY6G6EA0A0G2JKS1 128 aa10.99□□□□□ -0.65
PTPRK-204ENST00000368210 ATP5G3P48201 142 aa10.99□□□□□ -0.65
PTPRK-204ENST00000368210 LHFPL4Q7Z7J7 247 aa10.99□□□□□ -0.65
PTPRK-204ENST00000368210 LINC01551Q86U37 167 aa10.99□□□□□ -0.65
PTPRK-204ENST00000368210 SPACA3Q8IXA5 215 aa10.99□□□□□ -0.65
PTPRK-204ENST00000368210 COPS9Q8WXC6 57 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms