RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 PKIGQ9Y2B9 76 aa-0.18□□□□□ -2.44
RNU4-28P-201ENST00000364739 TTC28Q96AY4 2481 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 PCLOQ9Y6V0 5065 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 TET1Q8NFU7 2136 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 CCL16O15467 120 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 OCM2P0CE71 109 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 SPINK7P58062 85 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 RPS20P60866 119 aaKnown RBP-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 SNRPD2P62316 118 aaKnown RBP-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 OGFRL1Q5TC84 451 aaPredicted RBP-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 HIST2H3PS2Q5TEC6 136 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 LPCAT3Q6P1A2 487 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 C4orf3Q8WVX3 66 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 SLC35B4Q969S0 331 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 PRRT1Q99946 306 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 DRC3Q9H069 523 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 SCN8AQ9UQD0 1980 aa-0.19□□□□□ -2.44
RNU4-28P-201ENST00000364739 BDP1A6H8Y1 2624 aa-0.2□□□□□ -2.44
RNU4-28P-201ENST00000364739 LRRN3E7EW58 273 aa-0.2□□□□□ -2.44
RNU4-28P-201ENST00000364739 IFNA10P01566 189 aa-0.2□□□□□ -2.44
RNU4-28P-201ENST00000364739 BRMS1LQ5PSV4 323 aa-0.2□□□□□ -2.44
RNU4-28P-201ENST00000364739 CD200R1LQ6Q8B3 271 aa-0.2□□□□□ -2.44
RNU4-28P-201ENST00000364739 TMEM86BQ8N661 226 aa-0.2□□□□□ -2.44
RNU4-28P-201ENST00000364739 PLPP5Q8NEB5 264 aa-0.2□□□□□ -2.44
RNU4-28P-201ENST00000364739 COMMD5Q9GZQ3 224 aa-0.2□□□□□ -2.44
RNU4-28P-201ENST00000364739 PRTFDC1Q9NRG1 225 aa-0.2□□□□□ -2.44
RNU4-28P-201ENST00000364739 TAS2R7Q9NYW3 318 aa-0.2□□□□□ -2.44
RNU4-28P-201ENST00000364739 SIP14410 1827 aa-0.2□□□□□ -2.44
RNU4-28P-201ENST00000364739 TLCD2A6NGC4 264 aa-0.21□□□□□ -2.44
RNU4-28P-201ENST00000364739 OR2J2O76002 312 aa-0.21□□□□□ -2.44
RNU4-28P-201ENST00000364739 OR5G3P0C626 314 aa-0.21□□□□□ -2.44
RNU4-28P-201ENST00000364739 RPL5P46777 297 aaKnown RBP-0.21□□□□□ -2.44
RNU4-28P-201ENST00000364739 ESRGQ1W209 222 aa-0.21□□□□□ -2.44
RNU4-28P-201ENST00000364739 ANKRD29Q8N6D5 301 aa-0.21□□□□□ -2.44
RNU4-28P-201ENST00000364739 PPP1R2P1Q96PQ5 205 aa-0.21□□□□□ -2.44
RNU4-28P-201ENST00000364739 C6orf62Q9GZU0 229 aaPredicted RBP-0.21□□□□□ -2.44
RNU4-28P-201ENST00000364739 UBAP1Q9NZ09 502 aa-0.21□□□□□ -2.44
RNU4-28P-201ENST00000364739 TENM4Q6N022 2769 aa-0.22□□□□□ -2.44
RNU4-28P-201ENST00000364739 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.22□□□□□ -2.44
RNU4-28P-201ENST00000364739 FAM25EA8MYX2 175 aa-0.22□□□□□ -2.44
RNU4-28P-201ENST00000364739 SLC16A4O15374 487 aa-0.22□□□□□ -2.44
RNU4-28P-201ENST00000364739 DEXIO95424 95 aa-0.22□□□□□ -2.44
RNU4-28P-201ENST00000364739 IGLV3-1P01715 115 aa-0.22□□□□□ -2.44
RNU4-28P-201ENST00000364739 AP2S1P53680 142 aaPredicted RBP-0.22□□□□□ -2.44
RNU4-28P-201ENST00000364739 FAM151BQ6UXP7 276 aa-0.22□□□□□ -2.44
RNU4-28P-201ENST00000364739 LINC00575Q6W349 94 aa-0.22□□□□□ -2.44
RNU4-28P-201ENST00000364739 LSM5Q9Y4Y9 91 aaKnown RBP-0.22□□□□□ -2.44
RNU4-28P-201ENST00000364739 MYO3BQ8WXR4 1341 aa-0.22□□□□□ -2.44
RNU4-28P-201ENST00000364739 WRNQ14191 1432 aaPredicted RBP eCLIP-0.22□□□□□ -2.45
RNU4-28P-201ENST00000364739 PTPRZ1P23471 2315 aaPredicted RBP-0.22□□□□□ -2.45
RNU4-28P-201ENST00000364739 A0A0A6YYH2 397 aa-0.23□□□□□ -2.45
RNU4-28P-201ENST00000364739 A6NJ64 397 aa-0.23□□□□□ -2.45
RNU4-28P-201ENST00000364739 PSMD12O00232 456 aaPredicted RBP-0.23□□□□□ -2.45
RNU4-28P-201ENST00000364739 HIST1H1TP22492 207 aaPredicted RBP-0.23□□□□□ -2.45
RNU4-28P-201ENST00000364739 LINC01554Q52M75 96 aa-0.23□□□□□ -2.45
RNU4-28P-201ENST00000364739 ITFG2Q969R8 447 aa-0.23□□□□□ -2.45
RNU4-28P-201ENST00000364739 TMEM56-RWDD3S4R434 201 aa-0.23□□□□□ -2.45
RNU4-28P-201ENST00000364739 TNNC2P02585 160 aa-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 OR4E1P0C645 316 aa-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 S100A4P26447 101 aaKnown RBP-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 TRAPPC6BQ86SZ2 158 aa-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 ZGRF1Q86YA3 2104 aa-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 C20orf196Q8IYI0 205 aa-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 OR8D4Q8NGM9 314 aa-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 FAM103A1Q9BTL3 118 aaKnown RBP-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 NHP2Q9NX24 153 aaKnown RBP-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 KMT2CQ8NEZ4 4911 aaKnown RBP-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 MED1Q15648 1581 aaPredicted RBP-0.24□□□□□ -2.45
RNU4-28P-201ENST00000364739 PTPRFP10586 1907 aa-0.25□□□□□ -2.45
RNU4-28P-201ENST00000364739 IGHV1-58A0A0C4DH39 117 aa-0.25□□□□□ -2.45
RNU4-28P-201ENST00000364739 K7EIL1 84 aa-0.25□□□□□ -2.45
RNU4-28P-201ENST00000364739 SPCS3P61009 180 aa-0.25□□□□□ -2.45
RNU4-28P-201ENST00000364739 EXOC3-AS1Q8N2X6 119 aa-0.25□□□□□ -2.45
RNU4-28P-201ENST00000364739 ST6GALNAC3Q8NDV1 305 aa-0.25□□□□□ -2.45
RNU4-28P-201ENST00000364739 TEX47Q8TBZ9 253 aa-0.25□□□□□ -2.45
RNU4-28P-201ENST00000364739 TSPAN32Q96QS1 320 aa-0.25□□□□□ -2.45
RNU4-28P-201ENST00000364739 C14orf105Q9NVL8 296 aa-0.25□□□□□ -2.45
RNU4-28P-201ENST00000364739 UTP11Q9Y3A2 253 aaKnown RBP-0.25□□□□□ -2.45
RNU4-28P-201ENST00000364739 SPTBP11277 2137 aa-0.25□□□□□ -2.45
RNU4-28P-201ENST00000364739 MUC2Q02817 5179 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 IGF2RP11717 2491 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 OBSL1O75147 1896 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 C9orf84Q5VXU9 1444 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 ZNF682O95780 498 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 CRYZL1O95825 349 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 ISG15P05161 165 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 SPOPLQ6IQ16 392 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 C8orf74Q6P047 294 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 WFDC5Q8TCV5 224 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 DCSTAMPQ9H295 470 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 PSTPIP2Q9H939 334 aa-0.26□□□□□ -2.45
RNU4-28P-201ENST00000364739 COL7A1Q02388 2944 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 ZFYVE26Q68DK2 2539 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 DMBT1Q9UGM3 2413 aaPredicted RBP-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 NUP155O75694 1391 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 SMIM9A6NGZ8 99 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 C1orf196B1AJZ1 125 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 TGOLN2O43493 480 aa-0.27□□□□□ -2.45
RNU4-28P-201ENST00000364739 GADD45GO95257 159 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms