RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 PNKDQ8N490 385 aa14.76□□□□□ -0.05
SMG5-201ENST00000361813 UBE2V1Q13404 147 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 ZNF114Q8NC26 417 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 COQ2Q96H96 371 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 ST20Q9HBF5 79 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 TRBV20OR9-2A0A075B6H5 130 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 FAM90A9PA6NNJ1 464 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 H7C2G1 150 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 M0R3E3 92 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 TYMSP04818 313 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 ARL6IP6Q8N6S5 226 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 LINC00479Q96M42 142 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 IGHV3OR16-13A0A075B7E8 117 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 IGHV3-74A0A0B4J1X5 117 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 TEX45Q8NA69 505 aa14.75□□□□□ -0.05
SMG5-201ENST00000361813 M0QZ24 198 aa14.74□□□□□ -0.05
SMG5-201ENST00000361813 RPS20P60866 119 aaKnown RBP14.74□□□□□ -0.05
SMG5-201ENST00000361813 C9orf106Q8NAJ2 232 aa14.74□□□□□ -0.05
SMG5-201ENST00000361813 MCRIP2Q9BUT9 160 aaKnown RBP14.74□□□□□ -0.05
SMG5-201ENST00000361813 CLEC7AQ9BXN2 247 aa14.74□□□□□ -0.05
SMG5-201ENST00000361813 FOXI3A8MTJ6 420 aaPredicted RBP14.74□□□□□ -0.05
SMG5-201ENST00000361813 SFTPCP11686 197 aa14.74□□□□□ -0.05
SMG5-201ENST00000361813 PRB3Q04118 309 aaPredicted RBP14.74□□□□□ -0.05
SMG5-201ENST00000361813 FAM27E3Q08E93 113 aa14.74□□□□□ -0.05
SMG5-201ENST00000361813 OR1N2Q8NGR9 330 aa14.74□□□□□ -0.05
SMG5-201ENST00000361813 NPIPB11E5RHQ5 1161 aa14.74□□□□□ -0.05
SMG5-201ENST00000361813 DMRTC2Q8IXT2 367 aaPredicted RBP14.74□□□□□ -0.05
SMG5-201ENST00000361813 ABCA4P78363 2273 aa14.74□□□□□ -0.05
SMG5-201ENST00000361813 A0A1W2PS18 150 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 ORMDL3Q8N138 153 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 USF3Q68DE3 2245 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 TMEM238LA0A1B0GVL6 79 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 TCRBV4S1A1TA0A5B7 111 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 A6NJY4 79 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 TM4SF5O14894 197 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 MLANAQ16655 118 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 FOXA2Q9Y261 457 aaPredicted RBP14.73□□□□□ -0.05
SMG5-201ENST00000361813 IGHV3OR16-8A0A075B7F1 116 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 TIMM23BQ5SRD1 257 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 ZCCHC24Q8N2G6 241 aaKnown RBP14.73□□□□□ -0.05
SMG5-201ENST00000361813 LOXL4Q96JB6 756 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 ZFP36L1Q07352 338 aaKnown RBP14.73□□□□□ -0.05
SMG5-201ENST00000361813 Q0VFX4 171 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 NUP35Q8NFH5 326 aa14.73□□□□□ -0.05
SMG5-201ENST00000361813 HIST1H1AQ02539 215 aaPredicted RBP14.72□□□□□ -0.05
SMG5-201ENST00000361813 COLCA1Q6ZS62 124 aa14.72□□□□□ -0.05
SMG5-201ENST00000361813 ALPK3Q96L96 1907 aa14.72□□□□□ -0.05
SMG5-201ENST00000361813 PPIAL4CA0A0B4J2A2 164 aa14.72□□□□□ -0.05
SMG5-201ENST00000361813 PPIAL4GP0DN37 164 aa14.72□□□□□ -0.05
SMG5-201ENST00000361813 FAM90A1Q86YD7 464 aa14.72□□□□□ -0.05
SMG5-201ENST00000361813 F2RL2O00254 374 aa14.72□□□□□ -0.05
SMG5-201ENST00000361813 CACNG7P62955 275 aa14.72□□□□□ -0.05
SMG5-201ENST00000361813 CD177Q8N6Q3 437 aa14.72□□□□□ -0.05
SMG5-201ENST00000361813 LY96Q9Y6Y9 160 aa14.72□□□□□ -0.05
SMG5-201ENST00000361813 COL4A3Q01955 1670 aa14.72□□□□□ -0.05
SMG5-201ENST00000361813 A0A087X0K7 114 aa14.71□□□□□ -0.05
SMG5-201ENST00000361813 HTN1P15515 57 aa14.71□□□□□ -0.05
SMG5-201ENST00000361813 ZNF138P52744 262 aa14.71□□□□□ -0.05
SMG5-201ENST00000361813 Q0VG73 95 aa14.71□□□□□ -0.05
SMG5-201ENST00000361813 JKAMPQ9P055 326 aa14.71□□□□□ -0.05
SMG5-201ENST00000361813 PSG9Q00887 426 aa14.71□□□□□ -0.05
SMG5-201ENST00000361813 C1orf162Q8NEQ5 155 aaPredicted RBP14.71□□□□□ -0.05
SMG5-201ENST00000361813 OR2K2Q8NGT1 345 aa14.71□□□□□ -0.05
SMG5-201ENST00000361813 FOXC2Q99958 501 aa14.71□□□□□ -0.05
SMG5-201ENST00000361813 IGLV3-1P01715 115 aa14.71□□□□□ -0.05
SMG5-201ENST00000361813 MRPL52Q86TS9 123 aaKnown RBP14.71□□□□□ -0.05
SMG5-201ENST00000361813 OR11H12B2RN74 326 aa14.71□□□□□ -0.06
SMG5-201ENST00000361813 CCDC144NLQ6NUI1 221 aa14.71□□□□□ -0.06
SMG5-201ENST00000361813 OR11H1Q8NG94 326 aa14.71□□□□□ -0.06
SMG5-201ENST00000361813 OR11H2Q8NH07 326 aa14.71□□□□□ -0.06
SMG5-201ENST00000361813 ORAOV1Q8WV07 137 aa14.71□□□□□ -0.06
SMG5-201ENST00000361813 MBNL3Q9NUK0 354 aaKnown RBP14.71□□□□□ -0.06
SMG5-201ENST00000361813 LINC00312Q9Y6C7 94 aa14.7□□□□□ -0.06
SMG5-201ENST00000361813 SRRM5B3KS81 715 aa14.7□□□□□ -0.06
SMG5-201ENST00000361813 C9orf172C9J069 976 aa14.7□□□□□ -0.06
SMG5-201ENST00000361813 TTC9CQ8N5M4 171 aa14.7□□□□□ -0.06
SMG5-201ENST00000361813 C5orf30Q96GV9 206 aa14.7□□□□□ -0.06
SMG5-201ENST00000361813 SPRR3Q9UBC9 169 aa14.7□□□□□ -0.06
SMG5-201ENST00000361813 RABAC1Q9UI14 185 aa14.7□□□□□ -0.06
SMG5-201ENST00000361813 CHCHD1Q96BP2 118 aaKnown RBP14.7□□□□□ -0.06
SMG5-201ENST00000361813 C16orf92Q96LL3 132 aa14.7□□□□□ -0.06
SMG5-201ENST00000361813 TRAV30A0A087WSZ9 112 aa14.7□□□□□ -0.06
SMG5-201ENST00000361813 IGHV3-23P01764 117 aa14.7□□□□□ -0.06
SMG5-201ENST00000361813 CACNA1BQ00975 2339 aa14.69□□□□□ -0.06
SMG5-201ENST00000361813 NCOA6Q14686 2063 aaPredicted RBP14.69□□□□□ -0.06
SMG5-201ENST00000361813 ATP5L2Q7Z4Y8 100 aa14.69□□□□□ -0.06
SMG5-201ENST00000361813 CIARTQ8N365 385 aaPredicted RBP14.69□□□□□ -0.06
SMG5-201ENST00000361813 NHP2Q9NX24 153 aaKnown RBP14.69□□□□□ -0.06
SMG5-201ENST00000361813 IGHV1-69-2A0A0G2JMI3 117 aa14.69□□□□□ -0.06
SMG5-201ENST00000361813 OTORQ9NRC9 128 aa14.69□□□□□ -0.06
SMG5-201ENST00000361813 A0A1B0GWB2 263 aa14.68□□□□□ -0.06
SMG5-201ENST00000361813 IGLC2P0DOY2 106 aa14.68□□□□□ -0.06
SMG5-201ENST00000361813 IGLC3P0DOY3 106 aa14.68□□□□□ -0.06
SMG5-201ENST00000361813 YPEL3P61236 119 aaPredicted RBP14.68□□□□□ -0.06
SMG5-201ENST00000361813 ARHGAP21Q5T5U3 1957 aa14.68□□□□□ -0.06
SMG5-201ENST00000361813 COX11Q9Y6N1 276 aa14.68□□□□□ -0.06
SMG5-201ENST00000361813 IGHV3-49A0A0A0MS15 119 aa14.68□□□□□ -0.06
SMG5-201ENST00000361813 KIR3DL3Q8N743 410 aa14.68□□□□□ -0.06
SMG5-201ENST00000361813 MRPL27Q9P0M9 148 aaKnown RBP14.68□□□□□ -0.06
SMG5-201ENST00000361813 THADAQ6YHU6 1953 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms