RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 MYCNOSP40205 109 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 TNFRSF9Q07011 255 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 FABP9Q0Z7S8 132 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 ZNF345Q14585 488 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 MLANAQ16655 118 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 KLK9Q2XQG4 91 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 PDLIM3Q53GG5 364 aaPredicted RBP4.96□□□□□ -1.62
SUDS3-201ENST00000360286 FAM74A1Q5RGS3 127 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 ALKAL2Q6UX46 152 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 IL34Q6ZMJ4 242 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 SLC24A4Q8NFF2 622 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 OR11H1Q8NG94 326 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 OR4F17Q8NGA8 305 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 OR1N2Q8NGR9 330 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 C4orf3Q8WVX3 66 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 PCNPQ8WW12 178 aaKnown RBP4.96□□□□□ -1.62
SUDS3-201ENST00000360286 USMG5Q96IX5 58 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 OR4F4Q96R69 305 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 MAGT1Q9H0U3 335 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 ENY2Q9NPA8 101 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 HSPB7Q9UBY9 170 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 KLK9Q9UKQ9 250 aa4.96□□□□□ -1.62
SUDS3-201ENST00000360286 F11RQ9Y624 299 aaKnown RBP4.96□□□□□ -1.62
SUDS3-201ENST00000360286 PIGBOS1A0A0B4J2F0 54 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 FAM223BA6NKX1 122 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 INS-IGF2F8WCM5 200 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 K7EIM0 57 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 CIDEAO60543 219 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 SIX6O95475 246 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 IGHV3-48P01763 117 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 HSPB1P04792 205 aaKnown RBP4.95□□□□□ -1.62
SUDS3-201ENST00000360286 RNASE2P10153 161 aaKnown RBP4.95□□□□□ -1.62
SUDS3-201ENST00000360286 IAPPP10997 89 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 SLC25A6P12236 298 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 S100A2P29034 98 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 SNCAP37840 140 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 SLURP1P55000 103 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 RUNX1Q01196 453 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 OR2F1Q13607 317 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 IAH1Q2TAA2 248 aaPredicted RBP4.95□□□□□ -1.62
SUDS3-201ENST00000360286 C15orf32Q32M92 178 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 OXLD1Q5BKU9 147 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 PRR31Q5SQ13 230 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 ZNF343Q6P1L6 599 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 TREML4Q6UXN2 200 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 CLEC19AQ6UXS0 136 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 FAM223AQ8IWN6 122 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 MRPL41Q8IXM3 137 aaKnown RBP4.95□□□□□ -1.62
SUDS3-201ENST00000360286 NECAP1Q8NC96 275 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 OR4D5Q8NGN0 318 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 OR1P1Q8NH06 330 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 MISP3Q96FF7 219 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 ARL6Q9H0F7 186 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 HEYLQ9NQ87 328 aaPredicted RBP4.95□□□□□ -1.62
SUDS3-201ENST00000360286 GSKIPQ9P0R6 139 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 PEF1Q9UBV8 284 aaKnown RBP4.95□□□□□ -1.62
SUDS3-201ENST00000360286 DNAH3Q8TD57 4116 aa4.95□□□□□ -1.62
SUDS3-201ENST00000360286 ELOA3CA0A087WX78 387 aaPredicted RBP4.94□□□□□ -1.62
SUDS3-201ENST00000360286 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.94□□□□□ -1.62
SUDS3-201ENST00000360286 C5orf51A6NDU8 294 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 PPP5D1E7EU14 171 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 LINC01619G3V211 115 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 I3L2K1 104 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 GGCTO75223 188 aaKnown RBP4.94□□□□□ -1.62
SUDS3-201ENST00000360286 SCGB1D2O95969 90 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 MT-CO2P00403 227 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 PF4P02776 101 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 CLEC3BP05452 202 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 OR8U8P0C7N1 319 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 METTL15P1P0C7V9 234 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 SUB1P53999 127 aaKnown RBP eCLIP4.94□□□□□ -1.62
SUDS3-201ENST00000360286 ID3Q02535 119 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 ZNF616Q08AN1 781 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 HAGHQ16775 308 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 BSXQ3C1V8 233 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 PVRIGQ6DKI7 326 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 EIF5AL1Q6IS14 154 aaKnown RBP4.94□□□□□ -1.62
SUDS3-201ENST00000360286 LINC00482Q8N8I6 264 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 ZNF114Q8NC26 417 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 OR1L6Q8NGR2 347 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 DTD1Q8TEA8 209 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 C2CD4CQ8TF44 421 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 TMEM170AQ8WVE7 144 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 DCUN1D4Q92564 292 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 DPF1Q92782 380 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 DLX4Q92988 240 aaPredicted RBP4.94□□□□□ -1.62
SUDS3-201ENST00000360286 EEF1AKMT3Q96AZ1 226 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 PINX1Q96BK5 328 aaKnown RBP4.94□□□□□ -1.62
SUDS3-201ENST00000360286 WDR89Q96FK6 387 aaPredicted RBP4.94□□□□□ -1.62
SUDS3-201ENST00000360286 CCDC140Q96MF4 163 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 HIPK2Q9H2X6 1198 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 GAR1Q9NY12 217 aaKnown RBP4.94□□□□□ -1.62
SUDS3-201ENST00000360286 THYN1Q9P016 225 aa4.94□□□□□ -1.62
SUDS3-201ENST00000360286 TRBV7-1A0A0A6YYK4 115 aa4.93□□□□□ -1.62
SUDS3-201ENST00000360286 RNF222A6NCQ9 220 aa4.93□□□□□ -1.62
SUDS3-201ENST00000360286 SEC14L6B5MCN3 397 aa4.93□□□□□ -1.62
SUDS3-201ENST00000360286 HSBP1L1C9JCN9 74 aa4.93□□□□□ -1.62
SUDS3-201ENST00000360286 FAM90A26D6RGX4 464 aa4.93□□□□□ -1.62
SUDS3-201ENST00000360286 F8W735 103 aaPredicted RBP4.93□□□□□ -1.62
SUDS3-201ENST00000360286 BMPR1BO00238 502 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms