RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 NDUFA3O95167 84 aa11.89□□□□□ -0.51
GABPB1-202ENST00000359031 MOSP00540 346 aa11.89□□□□□ -0.51
GABPB1-202ENST00000359031 TRGC2P03986 189 aa11.89□□□□□ -0.51
GABPB1-202ENST00000359031 KLRD1Q13241 179 aa11.89□□□□□ -0.51
GABPB1-202ENST00000359031 MMDQ15546 238 aa11.89□□□□□ -0.51
GABPB1-202ENST00000359031 CCDC144NLQ6NUI1 221 aa11.89□□□□□ -0.51
GABPB1-202ENST00000359031 NECAP1Q8NC96 275 aa11.89□□□□□ -0.51
GABPB1-202ENST00000359031 TMEM116Q8NCL8 245 aa11.89□□□□□ -0.51
GABPB1-202ENST00000359031 NPBQ8NG41 125 aa11.89□□□□□ -0.51
GABPB1-202ENST00000359031 OR4X1Q8NH49 305 aa11.89□□□□□ -0.51
GABPB1-202ENST00000359031 TNFRSF19Q9NS68 423 aa11.89□□□□□ -0.51
GABPB1-202ENST00000359031 CRYBG3Q68DQ2 2970 aa11.88□□□□□ -0.51
GABPB1-202ENST00000359031 ELOA3CA0A087WX78 387 aaPredicted RBP11.88□□□□□ -0.51
GABPB1-202ENST00000359031 UBE2L3P68036 154 aaKnown RBP11.88□□□□□ -0.51
GABPB1-202ENST00000359031 ZNF90Q03938 601 aa11.88□□□□□ -0.51
GABPB1-202ENST00000359031 MINOS1Q5TGZ0 78 aa11.88□□□□□ -0.51
GABPB1-202ENST00000359031 OR5T1Q8NG75 326 aa11.88□□□□□ -0.51
GABPB1-202ENST00000359031 OR5AU1Q8NGC0 362 aa11.88□□□□□ -0.51
GABPB1-202ENST00000359031 SFRP2Q96HF1 295 aa11.88□□□□□ -0.51
GABPB1-202ENST00000359031 MINOS1-NBL1R4GNA1 71 aa11.88□□□□□ -0.51
GABPB1-202ENST00000359031 HIVEP3Q5T1R4 2406 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 ZNF98A6NK75 572 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HIST1H2BKO60814 126 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 GOSR1O95249 250 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HIST1H2BJP06899 126 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HIST1H2BOP23527 126 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HIST1H2BBP33778 126 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HIST1H2BDP58876 126 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HIST1H2BCP62807 126 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 LCN2P80188 198 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HIST2H2BEQ16778 126 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.87□□□□□ -0.51
GABPB1-202ENST00000359031 VMO1Q7Z5L0 202 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 OR2T10Q8NGZ9 312 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HIST1H2BHQ93079 126 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HIST1H2BNQ99877 126 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HIST1H2BMQ99879 126 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 ELOVL1Q9BW60 279 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 ZNF355PQ9NSJ1 428 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 HILPDAQ9Y5L2 63 aa11.87□□□□□ -0.51
GABPB1-202ENST00000359031 PPP5D1E7EU14 171 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 C19orf84I3L1E1 186 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 PHOX2AO14813 284 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 IGHV3-48P01763 117 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 TYMSP04818 313 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 SMIM6P0DI80 62 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
GABPB1-202ENST00000359031 MEOX2P50222 304 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 FAM3BP58499 235 aaPredicted RBP11.86□□□□□ -0.51
GABPB1-202ENST00000359031 PATE2Q6UY27 113 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 OR1L6Q8NGR2 347 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 PERPQ96FX8 193 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 NAV3Q8IVL0 2385 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 A0A1W2PPQ1 181 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 PGPEP1LA6NFU8 196 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 GGTLC3B5MD39 225 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 FCN1O00602 326 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 CNIH1O95406 144 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 OR10J4P0C629 311 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 HOXA5P20719 270 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 PLP1P60201 277 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 MORN5Q5VZ52 161 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 TEX38Q6PEX7 206 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 LHFPL4Q7Z7J7 247 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 STXBP6Q8NFX7 210 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 OCC1Q8TAD7 63 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 EAF1Q96JC9 268 aaPredicted RBP11.86□□□□□ -0.51
GABPB1-202ENST00000359031 C12orf57Q99622 126 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 PAXXQ9BUH6 204 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 SIRPDQ9H106 197 aa11.86□□□□□ -0.51
GABPB1-202ENST00000359031 TRAV5A0A0B4J249 113 aa11.85□□□□□ -0.51
GABPB1-202ENST00000359031 IGHV2-70DA0A0C4DH43 119 aa11.85□□□□□ -0.51
GABPB1-202ENST00000359031 NDUFS7O75251 213 aa11.85□□□□□ -0.51
GABPB1-202ENST00000359031 TRGC1P0CF51 173 aa11.85□□□□□ -0.51
GABPB1-202ENST00000359031 APELAP0DMC3 54 aa11.85□□□□□ -0.51
GABPB1-202ENST00000359031 ZFP36P26651 326 aaKnown RBP11.85□□□□□ -0.51
GABPB1-202ENST00000359031 NDUFA6P56556 154 aa11.85□□□□□ -0.51
GABPB1-202ENST00000359031 C19orf35Q6ZS72 473 aa11.85□□□□□ -0.51
GABPB1-202ENST00000359031 OR10G8Q8NGN5 311 aa11.85□□□□□ -0.51
GABPB1-202ENST00000359031 FRZBQ92765 325 aa11.85□□□□□ -0.51
GABPB1-202ENST00000359031 AURKAIP1Q9NWT8 199 aaPredicted RBP11.85□□□□□ -0.51
GABPB1-202ENST00000359031 DMRT1Q9Y5R6 373 aa11.85□□□□□ -0.51
GABPB1-202ENST00000359031 FBN2P35556 2912 aa11.84□□□□□ -0.51
GABPB1-202ENST00000359031 I3L2K1 104 aa11.84□□□□□ -0.51
GABPB1-202ENST00000359031 CRYBB3P26998 211 aa11.84□□□□□ -0.51
GABPB1-202ENST00000359031 GNG4P50150 75 aa11.84□□□□□ -0.51
GABPB1-202ENST00000359031 FOXL1Q12952 345 aa11.84□□□□□ -0.51
GABPB1-202ENST00000359031 C5orf64Q2M2E5 130 aa11.84□□□□□ -0.51
GABPB1-202ENST00000359031 LINC00305Q7Z4B0 112 aa11.84□□□□□ -0.51
GABPB1-202ENST00000359031 OR51M1Q9H341 326 aa11.84□□□□□ -0.51
GABPB1-202ENST00000359031 TBL2Q9Y4P3 447 aaKnown RBP11.84□□□□□ -0.51
GABPB1-202ENST00000359031 ABCA4P78363 2273 aa11.84□□□□□ -0.51
GABPB1-202ENST00000359031 CSMD1Q96PZ7 3565 aa11.84□□□□□ -0.51
GABPB1-202ENST00000359031 TRAV9-1A0A075B6T8 112 aa11.83□□□□□ -0.52
GABPB1-202ENST00000359031 HELTA6NFD8 242 aa11.83□□□□□ -0.52
GABPB1-202ENST00000359031 OVOL3O00110 214 aa11.83□□□□□ -0.52
GABPB1-202ENST00000359031 S100A9P06702 114 aaKnown RBP11.83□□□□□ -0.52
GABPB1-202ENST00000359031 CDX1P47902 265 aaPredicted RBP11.83□□□□□ -0.52
GABPB1-202ENST00000359031 LGALS4P56470 323 aa11.83□□□□□ -0.52
GABPB1-202ENST00000359031 CENPWQ5EE01 88 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms