RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 RSPO4Q2I0M5 234 aaPredicted RBP9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 TMEM86BQ8N661 226 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 TSC2P49815 1807 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 CD5LO43866 347 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 LHX2P50458 406 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 ACTL10Q5JWF8 245 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 FDCSPQ8NFU4 85 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 TRPM7Q96QT4 1865 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 CTHRC1Q96CG8 243 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 TEX38Q6PEX7 206 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 DEFB104AQ8WTQ1 72 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 C18orf12Q96KH6 178 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 CHCHD5Q9BSY4 110 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 JPT2Q9H910 190 aa9.67□□□□□ -0.86
SPTBN1-202ENST00000356805 IGHV3-73A0A0B4J1V6 119 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 KBTBD11-OT1A0A1B0GTJ5 212 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 RPL32P62910 135 aaKnown RBP9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 RHOGP84095 191 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 ORMDL2Q53FV1 153 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 GDF15Q99988 308 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 LAMTOR3Q9UHA4 124 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 FAM201AQ5SY85 155 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 ACP7Q6ZNF0 438 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 OR52E5Q8NH55 327 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 EGR4Q05215 589 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 TBX6O95947 436 aaPredicted RBP9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 COX6A1P12074 109 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 IGFBP3P17936 291 aaPredicted RBP9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 TPTE2P1Q5T6R2 138 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 DPM3Q9P2X0 92 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 COX11Q9Y6N1 276 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 A0A0G2JMM0 328 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 A0A1W2PPB8 328 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 KIR3DP1A8MWS1 328 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 OR5P3Q8WZ94 311 aa9.66□□□□□ -0.86
SPTBN1-202ENST00000356805 INS-IGF2F8WCM5 200 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 INSP01308 110 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 OR9G9P0C7N8 305 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 TIMP3P35625 211 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 GNG5P63218 68 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 FAM57AQ8TBR7 257 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 DLX4Q92988 240 aaPredicted RBP9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 NAPSAO96009 420 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 C1QCP02747 245 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 SLC25A48Q6ZT89 311 aaKnown RBP9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 PLXND1Q9Y4D7 1925 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 DYSFO75923 2080 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 A0A1W2PQF6 199 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 SUMO4Q6EEV6 95 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 CHTOPQ9Y3Y2 248 aaKnown RBP9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 DOCK4Q8N1I0 1966 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 LOC101059948A0A1B0GTJ6 334 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 M0R2P5 195 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 CD24P25063 80 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 FAM27E3Q08E93 113 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 TMEM144Q7Z5S9 345 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 TSKUQ8WUA8 353 aa9.65□□□□□ -0.86
SPTBN1-202ENST00000356805 SBF1O95248 1867 aa9.65□□□□□ -0.87
SPTBN1-202ENST00000356805 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.65□□□□□ -0.87
SPTBN1-202ENST00000356805 EFEMP2O95967 443 aa9.65□□□□□ -0.87
SPTBN1-202ENST00000356805 SRSF7Q16629 238 aaKnown RBP eCLIP9.65□□□□□ -0.87
SPTBN1-202ENST00000356805 MYOD1P15172 320 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 RNASE7Q9H1E1 156 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 IFI27L2Q9H2X8 130 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 TOMM40O96008 361 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 PPIFP30405 207 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 HS3ST3B1Q9Y662 390 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 ID3Q02535 119 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 ATXN8Q156A1 80 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 SSBP2P81877 361 aaPredicted RBP9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 OCIAD2Q56VL3 154 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 CT83Q5H943 113 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 SPRED2Q7Z698 418 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 ZIC4Q8N9L1 334 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 PCNX2A6NKB5 2137 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 NDUFS6O75380 124 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 IGHV2-70P01814 119 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 GZMBP10144 247 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 SRSF3P84103 164 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 SRSF1Q07955 248 aaKnown RBP eCLIP9.64□□□□□ -0.874e-7■□□□□ 9.1
SPTBN1-202ENST00000356805 TMEM54Q969K7 222 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 PILRBQ9UKJ0 227 aa9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 GATA2P23769 480 aaPredicted RBP9.64□□□□□ -0.87
SPTBN1-202ENST00000356805 TM4SF5O14894 197 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 SLC25A45Q8N413 288 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 ASCL2Q99929 193 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 MMP23AO75900 390 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 CD33P20138 364 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 NEU4Q8WWR8 484 aaPredicted RBP9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 OVOL2Q9BRP0 275 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 PILRAQ9UKJ1 303 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 IGKV1-8A0A0C4DH67 115 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 MIR17HGQ75NE6 70 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 SP9P0CG40 484 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 CDKN1AP38936 164 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 OTORQ9NRC9 128 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 NYNRINQ9P2P1 1898 aaKnown RBP9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 ADAMTSL3P82987 1691 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 SPTBN2O15020 2390 aa9.63□□□□□ -0.87
SPTBN1-202ENST00000356805 COL24A1Q17RW2 1714 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms