RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 LTBRP36941 435 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 HIST1H4AP62805 103 aaKnown RBP13.35□□□□□ -0.27
RXRA-201ENST00000356384 GTSCR1Q86UQ5 136 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 CASP8AP2Q9UKL3 1982 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 A0A1W2PRE2 83 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 NPIPB5A8MRT5 1133 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 GVINP1Q7Z2Y8 2422 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 OR9G9P0C7N8 305 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 EFNB3Q15768 340 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 SAMD5Q5TGI4 173 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 MORN3Q6PF18 240 aaPredicted RBP13.35□□□□□ -0.27
RXRA-201ENST00000356384 IMMP1LQ96LU5 166 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 CCL1P22362 96 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 IGHV3-73A0A0B4J1V6 119 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 TMEM8BA6NDV4 472 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 IGFBP3P17936 291 aaPredicted RBP13.34□□□□□ -0.27
RXRA-201ENST00000356384 TMEM155Q4W5P6 130 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 TIMM23O14925 209 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 CDK2AP2O75956 126 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 GZMBP10144 247 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 PAX8Q06710 450 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 GAGE13Q4V321 117 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 PRR31Q5SQ13 230 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 ZNF497Q6ZNH5 498 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 TRAV5A0A0B4J249 113 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 SIGLEC15Q6ZMC9 328 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 TOMM40O96008 361 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 MS4A6AQ9H2W1 248 aa13.34□□□□□ -0.27
RXRA-201ENST00000356384 LY6DQ14210 128 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 UBE2DNLQ8IWF7 75 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 GNB1LQ9BYB4 327 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 HEATR5BQ9P2D3 2071 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 HIST1H2BKO60814 126 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 HIST1H2BJP06899 126 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 HIST1H2BOP23527 126 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 HIST1H2BBP33778 126 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 HIST1H2BDP58876 126 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 HIST1H2BCP62807 126 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 HIST2H2BEQ16778 126 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.33□□□□□ -0.28
RXRA-201ENST00000356384 HIST1H2BHQ93079 126 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 HIST1H2BNQ99877 126 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 HIST1H2BMQ99879 126 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 A0A087WX48 190 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 RNASE6Q93091 150 aaKnown RBP13.33□□□□□ -0.28
RXRA-201ENST00000356384 CHCHD1Q96BP2 118 aaKnown RBP13.33□□□□□ -0.28
RXRA-201ENST00000356384 PAX4O43316 350 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 PRTN3P24158 256 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 PRCDQ00LT1 54 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 TSKUQ8WUA8 353 aa13.33□□□□□ -0.28
RXRA-201ENST00000356384 NAA38Q9BRA0 125 aaKnown RBP13.33□□□□□ -0.28
RXRA-201ENST00000356384 IGKV2-40A0A087WW87 121 aaPredicted RBP13.32□□□□□ -0.28
RXRA-201ENST00000356384 IGKV2D-40P01614 121 aaPredicted RBP13.32□□□□□ -0.28
RXRA-201ENST00000356384 F2Z2F3 143 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 NCR2O95944 276 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 THBDP07204 575 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 HSD52Q0P140 79 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 OR10W1Q8NGF6 305 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 LAMTOR3Q9UHA4 124 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 TDRD6O60522 2096 aaKnown RBP13.32□□□□□ -0.28
RXRA-201ENST00000356384 LOC105371267A0A1B0GV96 52 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 OVOL1O14753 267 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 ERVK11-1P61568 191 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 ZNF48Q96MX3 618 aaPredicted RBP13.32□□□□□ -0.28
RXRA-201ENST00000356384 VSIRQ9H7M9 311 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 TRAV40A0A0B4J280 105 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 A6NNC1 897 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 LINC00271P0C7V0 271 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 LAGE3Q14657 143 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 TEX38Q6PEX7 206 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 ZNF562Q6V9R5 426 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 LYZL4Q96KX0 146 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 METRNQ9UJH8 293 aa13.32□□□□□ -0.28
RXRA-201ENST00000356384 ZDBF2Q9HCK1 2354 aa13.31□□□□□ -0.28
RXRA-201ENST00000356384 ARID2Q68CP9 1835 aa13.31□□□□□ -0.28
RXRA-201ENST00000356384 WNT2P09544 360 aa13.31□□□□□ -0.28
RXRA-201ENST00000356384 DMRTC2Q8IXT2 367 aaPredicted RBP13.31□□□□□ -0.28
RXRA-201ENST00000356384 PRADC1Q9BSG0 188 aa13.31□□□□□ -0.28
RXRA-201ENST00000356384 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.31□□□□□ -0.28
RXRA-201ENST00000356384 WFDC1Q9HC57 220 aa13.31□□□□□ -0.28
RXRA-201ENST00000356384 SSC4DQ8WTU2 575 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 RCHY1Q96PM5 261 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 PSME4Q14997 1843 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 TMEM238C9JI98 176 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 DUTP33316 252 aaKnown RBP13.3□□□□□ -0.28
RXRA-201ENST00000356384 RPL15P61313 204 aaKnown RBP13.3□□□□□ -0.28
RXRA-201ENST00000356384 LINC00114Q6XXX2 140 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 CRIM1Q9NZV1 1036 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 DOCK3Q8IZD9 2030 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 SAP30O75446 220 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 GAGE2BQ13066 116 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 TMEM249Q2WGJ8 235 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 ZNF876PQ49A33 203 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 GAGE2EQ4V326 116 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 GAGE2DQ9UEU5 116 aa13.3□□□□□ -0.28
RXRA-201ENST00000356384 RTTNQ86VV8 2226 aa13.29□□□□□ -0.28
RXRA-201ENST00000356384 SPTBN2O15020 2390 aa13.29□□□□□ -0.28
RXRA-201ENST00000356384 A0A087WV48 116 aa13.29□□□□□ -0.28
RXRA-201ENST00000356384 IGKV1-9A0A0C4DH69 117 aa13.29□□□□□ -0.28
RXRA-201ENST00000356384 H0YIZ8 118 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms