RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 C19orf24Q9BVV8 132 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 OSTCQ9NRP0 149 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 RNF114Q9Y508 228 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 SRIP30626 198 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 TAS2R60P59551 318 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 TNXAQ16473 311 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 VSTM2AQ8TAG5 236 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 IGF2BP2-AS1Q96M15 143 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 SUB1P53999 127 aaKnown RBP eCLIP15.76■□□□□ 0.11
COL13A1-201ENST00000354547 LEMD1Q68G75 181 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 PDPNQ86YL7 162 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 TMEM186Q96B77 213 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 GNB1LQ9BYB4 327 aa15.76■□□□□ 0.11
COL13A1-201ENST00000354547 IGKV1D-37A0A075B6S9 117 aa15.75■□□□□ 0.11
COL13A1-201ENST00000354547 TRAV9-1A0A075B6T8 112 aa15.75■□□□□ 0.11
COL13A1-201ENST00000354547 ISLRO14498 428 aa15.75■□□□□ 0.11
COL13A1-201ENST00000354547 ZNF253O75346 499 aa15.75■□□□□ 0.11
COL13A1-201ENST00000354547 TMEM136Q6ZRR5 245 aa15.75■□□□□ 0.11
COL13A1-201ENST00000354547 SIGLECL1Q8N7X8 197 aa15.75■□□□□ 0.11
COL13A1-201ENST00000354547 VMA21Q3ZAQ7 101 aa15.75■□□□□ 0.11
COL13A1-201ENST00000354547 C1orf194Q5T5A4 169 aa15.75■□□□□ 0.11
COL13A1-201ENST00000354547 MRPL32Q9BYC8 188 aaKnown RBP15.75■□□□□ 0.11
COL13A1-201ENST00000354547 TCRBV4S1A1TA0A5B7 111 aa15.74■□□□□ 0.11
COL13A1-201ENST00000354547 ATP5IP56385 69 aaPredicted RBP15.74■□□□□ 0.11
COL13A1-201ENST00000354547 PAFAH1B2P68402 229 aa15.74■□□□□ 0.11
COL13A1-201ENST00000354547 SNHG12Q9BXW3 62 aa15.74■□□□□ 0.11
COL13A1-201ENST00000354547 ARL2-SNX15V9GYD0 113 aa15.74■□□□□ 0.11
COL13A1-201ENST00000354547 E7EQL1 145 aa15.74■□□□□ 0.11
COL13A1-201ENST00000354547 FAM19A2Q8N3H0 131 aa15.74■□□□□ 0.11
COL13A1-201ENST00000354547 ST6GALNAC6Q969X2 333 aa15.74■□□□□ 0.11
COL13A1-201ENST00000354547 AMTP48728 403 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 TDGF1P3P51864 188 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 TCF15Q12870 199 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 Q8NA96 180 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 C2orf88Q9BSF0 95 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 TNFRSF19Q9NS68 423 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 IGHV1-8P0DP01 117 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 BPIFB3P59826 476 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 ZNF329Q86UD4 541 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 BEND2Q8NDZ0 799 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 MED13LQ71F56 2210 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 C22orf46C9J442 243 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 PEX7O00628 323 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 TOX4O94842 621 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 COX7A1P24310 79 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 PNKDQ8N490 385 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 OR1L4Q8NGR5 311 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 CDC42EP3Q9UKI2 254 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 ARHGAP32A7KAX9 2087 aa15.73■□□□□ 0.11
COL13A1-201ENST00000354547 VSTM5A8MXK1 200 aa15.72■□□□□ 0.11
COL13A1-201ENST00000354547 NTF3P20783 257 aa15.72■□□□□ 0.11
COL13A1-201ENST00000354547 RPL19P84098 196 aaKnown RBP15.72■□□□□ 0.11
COL13A1-201ENST00000354547 TPTE2P1Q5T6R2 138 aa15.72■□□□□ 0.11
COL13A1-201ENST00000354547 PRSS33Q8NF86 280 aa15.72■□□□□ 0.11
COL13A1-201ENST00000354547 ZNF331Q9NQX6 463 aaPredicted RBP15.72■□□□□ 0.11
COL13A1-201ENST00000354547 FBXL7Q9UJT9 491 aa15.72■□□□□ 0.11
COL13A1-201ENST00000354547 TBL2Q9Y4P3 447 aaKnown RBP15.72■□□□□ 0.11
COL13A1-201ENST00000354547 CORTO00230 105 aa15.72■□□□□ 0.11
COL13A1-201ENST00000354547 SLC25A5P05141 298 aaKnown RBP15.72■□□□□ 0.11
COL13A1-201ENST00000354547 CAMPP49913 170 aa15.72■□□□□ 0.11
COL13A1-201ENST00000354547 MFAP2P55001 183 aa15.72■□□□□ 0.11
COL13A1-201ENST00000354547 TMEM68Q96MH6 324 aa15.72■□□□□ 0.11
COL13A1-201ENST00000354547 ANKHD1Q8IWZ3 2542 aaKnown RBP15.71■□□□□ 0.11
COL13A1-201ENST00000354547 BMPR1BO00238 502 aa15.71■□□□□ 0.11
COL13A1-201ENST00000354547 WDR73Q6P4I2 378 aa15.71■□□□□ 0.11
COL13A1-201ENST00000354547 IGFBPL1Q8WX77 278 aa15.71■□□□□ 0.11
COL13A1-201ENST00000354547 FXYD5Q96DB9 178 aa15.71■□□□□ 0.11
COL13A1-201ENST00000354547 PGPA6NDG6 321 aa15.71■□□□□ 0.11
COL13A1-201ENST00000354547 AMY1AP04745 511 aa15.71■□□□□ 0.11
COL13A1-201ENST00000354547 BRS3P32247 399 aa15.71■□□□□ 0.11
COL13A1-201ENST00000354547 GPR6P46095 362 aaPredicted RBP15.71■□□□□ 0.11
COL13A1-201ENST00000354547 SLAQ13239 276 aa15.71■□□□□ 0.11
COL13A1-201ENST00000354547 SSBP4Q9BWG4 385 aaPredicted RBP15.71■□□□□ 0.11
COL13A1-201ENST00000354547 IGHV1-69-2A0A0G2JMI3 117 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 Q0VG73 95 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 TMEM155Q4W5P6 130 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 NUDT10Q8NFP7 164 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 NUDT11Q96G61 164 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 PTPRQQ9UMZ3 2332 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 TRBV9A0A0B4J1U6 114 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 SHISA9B4DS77 424 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 APCSP02743 223 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 UBE2G1P62253 170 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 RNF2Q99496 336 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 SMIM27A0A1W2PRY6 76 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 GPX1P07203 203 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 FAM87AP0C7U9 286 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 DLX6P56179 175 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 TMEM133Q9H2Q1 129 aa15.7■□□□□ 0.1
COL13A1-201ENST00000354547 ATRXP46100 2492 aa15.69■□□□□ 0.1
COL13A1-201ENST00000354547 BATFQ16520 125 aa15.69■□□□□ 0.1
COL13A1-201ENST00000354547 LINC01560Q8TB33 94 aa15.69■□□□□ 0.1
COL13A1-201ENST00000354547 VAMP8Q9BV40 100 aa15.69■□□□□ 0.1
COL13A1-201ENST00000354547 KIR2DL5BA0A0G2JN68 375 aa15.69■□□□□ 0.1
COL13A1-201ENST00000354547 KIR2DL5BA0A0G2JPC4 375 aa15.69■□□□□ 0.1
COL13A1-201ENST00000354547 IGLC7A0M8Q6 106 aa15.69■□□□□ 0.1
COL13A1-201ENST00000354547 TNFRSF13BO14836 293 aaPredicted RBP15.69■□□□□ 0.1
COL13A1-201ENST00000354547 MT-ND6P03923 174 aa15.69■□□□□ 0.1
COL13A1-201ENST00000354547 G0S2P27469 103 aa15.69■□□□□ 0.1
COL13A1-201ENST00000354547 RPL27AP46776 148 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms