RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PPOXP50336 477 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 Q8N976 141 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 PPP1R35Q8TAP8 253 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 RCHY1Q96PM5 261 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 ENY2Q9NPA8 101 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 SLC45A2Q9UMX9 530 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 OR10J4P0C629 311 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 TNCP24821 2201 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 RAB7AP51149 207 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 TCL1AP56279 114 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 PRB3Q04118 309 aaPredicted RBP6.94□□□□□ -1.3
TRIM55-204ENST00000353317 ZNF841Q6ZN19 808 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 TMEM136Q6ZRR5 245 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 MRPL52Q86TS9 123 aaKnown RBP6.94□□□□□ -1.3
TRIM55-204ENST00000353317 SIGLECL1Q8N7X8 197 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 SLC25A10Q9UBX3 287 aaPredicted RBP6.94□□□□□ -1.3
TRIM55-204ENST00000353317 TBL2Q9Y4P3 447 aaKnown RBP6.94□□□□□ -1.3
TRIM55-204ENST00000353317 OR51B2Q9Y5P1 312 aa6.94□□□□□ -1.3
TRIM55-204ENST00000353317 J3QR06 171 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 DLEU1O43261 78 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 OR7C2O60412 319 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 IGLV2-8P01709 118 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 IGKV1-16P04430 117 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 NPSP0C0P6 89 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 KRTDAPP60985 99 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 MLANAQ16655 118 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 TMEM200BQ69YZ2 307 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 LYG1Q8N1E2 194 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 CORO2AQ92828 525 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 TMEM167BQ9NRX6 74 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 ARL2-SNX15V9GYD0 113 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 A0A1W2PS18 150 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 FNDC10F2Z333 226 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 SUMO1P63165 101 aaKnown RBP6.93□□□□□ -1.3
TRIM55-204ENST00000353317 BATFQ16520 125 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 ASPHD1Q5U4P2 390 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 C11orf42Q8N5U0 333 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 NRGNQ92686 78 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 LPAR2Q9HBW0 351 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 NRN1Q9NPD7 142 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 OSTCQ9NRP0 149 aa6.93□□□□□ -1.3
TRIM55-204ENST00000353317 KBTBD11-OT1A0A1B0GTJ5 212 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 SRRM4A7MD48 611 aaKnown RBP6.92□□□□□ -1.3
TRIM55-204ENST00000353317 DIRC3C9JPN6 131 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 ISLRO14498 428 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 ITGB1BP1O14713 200 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 PLXNB1O43157 2135 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 CA1P00915 261 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-204ENST00000353317 MT-ND6P03923 174 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 AMTP48728 403 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 GNG10P50151 68 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 MRPS11P82912 194 aaKnown RBP6.92□□□□□ -1.3
TRIM55-204ENST00000353317 TIGITQ495A1 244 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 OR10J3Q5JRS4 329 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 IBA57Q5T440 356 aaKnown RBP6.92□□□□□ -1.3
TRIM55-204ENST00000353317 MRPL54Q6P161 138 aaKnown RBP6.92□□□□□ -1.3
TRIM55-204ENST00000353317 WDR73Q6P4I2 378 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 PLEKHA3Q9HB20 300 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 TECRQ9NZ01 308 aaKnown RBP6.92□□□□□ -1.3
TRIM55-204ENST00000353317 ZANQ9Y493 2812 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 ANKRD17O75179 2603 aaKnown RBP6.92□□□□□ -1.3
TRIM55-204ENST00000353317 APCP25054 2843 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 A1L4Q6 167 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 BMPR1BO00238 502 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 ZNF253O75346 499 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 PMCHP20382 165 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 COL8A1P27658 744 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 SRIP30626 198 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 CTRLP40313 264 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 PRCDQ00LT1 54 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 POU2AF1Q16633 256 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-204ENST00000353317 ZNF439Q8NDP4 499 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 OR9G1Q8NH87 305 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 IGFBPL1Q8WX77 278 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 KCNS1Q96KK3 526 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 IGF2BP2-AS1Q96M15 143 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 RNF2Q99496 336 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 ZNF586Q9NXT0 402 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 KAAG1Q9UBP8 84 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 GOLT1BQ9Y3E0 138 aa6.92□□□□□ -1.3
TRIM55-204ENST00000353317 SMIM27A0A1W2PRY6 76 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 OR5G3P0C626 314 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 MGST1P10620 155 aaKnown RBP6.91□□□□□ -1.3
TRIM55-204ENST00000353317 BTF3P20290 206 aaKnown RBP6.91□□□□□ -1.3
TRIM55-204ENST00000353317 MORN5Q5VZ52 161 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 NHLRC2Q8NBF2 726 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 OR4B1Q8NGF8 309 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 H1FXQ92522 213 aaKnown RBP6.91□□□□□ -1.3
TRIM55-204ENST00000353317 FAM168AQ92567 244 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 LINC00479Q96M42 142 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 RAB1BQ9H0U4 201 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 NCOR1P1Q9H4R4 102 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 LINC00574Q9H8X3 128 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 PRNDQ9UKY0 176 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 ZNF469Q96JG9 3925 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-204ENST00000353317 TEX50A0A1B0GTY4 177 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 CT45A6P0DMU7 189 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 CT45A5P0DMU8 189 aa6.91□□□□□ -1.3
TRIM55-204ENST00000353317 CT45A7P0DMV0 189 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms