RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ZNF525Q8N782 197 aa16.32■□□□□ 0.2
HDAC4-201ENST00000345617 LDLRAD4O15165 306 aa16.32■□□□□ 0.2
HDAC4-201ENST00000345617 TNFRSF6BO95407 300 aa16.32■□□□□ 0.2
HDAC4-201ENST00000345617 CENPVL1A0A0U1RR11 272 aa16.32■□□□□ 0.2
HDAC4-201ENST00000345617 RNASE4P34096 147 aaKnown RBP16.32■□□□□ 0.2
HDAC4-201ENST00000345617 TEX38Q6PEX7 206 aa16.32■□□□□ 0.2
HDAC4-201ENST00000345617 KLF17Q5JT82 389 aaPredicted RBP16.32■□□□□ 0.2
HDAC4-201ENST00000345617 CTHRC1Q96CG8 243 aa16.32■□□□□ 0.2
HDAC4-201ENST00000345617 PILRAQ9UKJ1 303 aa16.32■□□□□ 0.2
HDAC4-201ENST00000345617 EPDR1Q9UM22 224 aa16.32■□□□□ 0.2
HDAC4-201ENST00000345617 TCRBV4S1A1TA0A5B7 111 aa16.31■□□□□ 0.2
HDAC4-201ENST00000345617 FAM90A2PQ658T7 463 aa16.31■□□□□ 0.2
HDAC4-201ENST00000345617 OR10W1Q8NGF6 305 aa16.31■□□□□ 0.2
HDAC4-201ENST00000345617 ZNF501Q96CX3 271 aaPredicted RBP16.31■□□□□ 0.2
HDAC4-201ENST00000345617 LINC00312Q9Y6C7 94 aa16.31■□□□□ 0.2
HDAC4-201ENST00000345617 FHL5Q5TD97 284 aa16.31■□□□□ 0.2
HDAC4-201ENST00000345617 MAFAQ8NHW3 353 aaPredicted RBP16.31■□□□□ 0.2
HDAC4-201ENST00000345617 PRR7Q8TB68 274 aa16.31■□□□□ 0.2
HDAC4-201ENST00000345617 ADAMTS9Q9P2N4 1935 aa16.31■□□□□ 0.2
HDAC4-201ENST00000345617 LINC01565O15544 149 aa16.3■□□□□ 0.2
HDAC4-201ENST00000345617 SPRED2Q7Z698 418 aa16.3■□□□□ 0.2
HDAC4-201ENST00000345617 H3BMM0 161 aa16.3■□□□□ 0.2
HDAC4-201ENST00000345617 TPTE2P1Q5T6R2 138 aa16.3■□□□□ 0.2
HDAC4-201ENST00000345617 PEMTQ9UBM1 199 aa16.3■□□□□ 0.2
HDAC4-201ENST00000345617 TRGV11A0A075B6L2 103 aa16.3■□□□□ 0.2
HDAC4-201ENST00000345617 KLF4O43474 513 aa16.3■□□□□ 0.2
HDAC4-201ENST00000345617 HOXD3P31249 432 aaPredicted RBP16.3■□□□□ 0.2
HDAC4-201ENST00000345617 AMBPP02760 352 aa16.3■□□□□ 0.2
HDAC4-201ENST00000345617 TRAV2A0A0B4J234 112 aa16.3■□□□□ 0.2
HDAC4-201ENST00000345617 LEPROTO15243 131 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 TRGV3P03979 118 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-201ENST00000345617 GZMBP10144 247 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 RPRMLQ8N4K4 120 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 AMELYQ99218 206 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 FOXA2Q9Y261 457 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-201ENST00000345617 KIAA1549LQ6ZVL6 1849 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 IGHV3-72A0A0B4J1Y9 119 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 COX11Q9Y6N1 276 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 TMEM155Q4W5P6 130 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 EDA2RQ9HAV5 297 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 TOMM7Q9P0U1 55 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 GLRXP35754 106 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 SLC25A39Q9BZJ4 359 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-201ENST00000345617 OTOGLQ3ZCN5 2332 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 DSCAML1Q8TD84 2053 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 NEGR1Q7Z3B1 354 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 PLA2G2FQ9BZM2 168 aa16.29■□□□□ 0.2
HDAC4-201ENST00000345617 ZNF71Q9NQZ8 489 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-201ENST00000345617 C2orf16Q68DN1 1984 aa16.28■□□□□ 0.2
HDAC4-201ENST00000345617 SPINK8P0C7L1 97 aa16.28■□□□□ 0.2
HDAC4-201ENST00000345617 CMC4P56277 68 aaPredicted RBP16.28■□□□□ 0.2
HDAC4-201ENST00000345617 TGFAP01135 160 aa16.28■□□□□ 0.2
HDAC4-201ENST00000345617 EGR4Q05215 589 aa16.28■□□□□ 0.2
HDAC4-201ENST00000345617 RPL39P5Q59GN2 51 aa16.28■□□□□ 0.2
HDAC4-201ENST00000345617 ZNF826PQ6ZT77 177 aa16.28■□□□□ 0.2
HDAC4-201ENST00000345617 MRPL20Q9BYC9 149 aaKnown RBP16.28■□□□□ 0.2
HDAC4-201ENST00000345617 DUSP14O95147 198 aaKnown RBP16.28■□□□□ 0.2
HDAC4-201ENST00000345617 TOMM40O96008 361 aa16.28■□□□□ 0.2
HDAC4-201ENST00000345617 ATRAIDQ6UW56 229 aa16.28■□□□□ 0.2
HDAC4-201ENST00000345617 C1QTNF5Q9BXJ0 243 aa16.28■□□□□ 0.2
HDAC4-201ENST00000345617 TRAV14DV4A0A0A6YYC5 116 aa16.27■□□□□ 0.2
HDAC4-201ENST00000345617 VWC2LB2RUY7 222 aa16.27■□□□□ 0.2
HDAC4-201ENST00000345617 CD28P10747 220 aa16.27■□□□□ 0.2
HDAC4-201ENST00000345617 PLXNA4Q9HCM2 1894 aa16.27■□□□□ 0.2
HDAC4-201ENST00000345617 ITGB1BP1O14713 200 aa16.27■□□□□ 0.2
HDAC4-201ENST00000345617 LINC00271P0C7V0 271 aa16.27■□□□□ 0.2
HDAC4-201ENST00000345617 ATP5G3P48201 142 aa16.27■□□□□ 0.2
HDAC4-201ENST00000345617 IGKV1D-42A0A075B6H8 117 aa16.27■□□□□ 0.19
HDAC4-201ENST00000345617 ZIC4Q8N9L1 334 aa16.27■□□□□ 0.19
HDAC4-201ENST00000345617 C2orf82Q6UX34 121 aa16.27■□□□□ 0.19
HDAC4-201ENST00000345617 DPM3Q9P2X0 92 aa16.27■□□□□ 0.19
HDAC4-201ENST00000345617 MSGN1A6NI15 193 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 GFRA3O60609 400 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 YPEL1O60688 119 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 YPEL2Q96QA6 119 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 CSPG4Q6UVK1 2322 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 TMEM167AQ8TBQ9 72 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 CST9LQ9H4G1 147 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 NUP210Q8TEM1 1887 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-201ENST00000345617 COLCA2A8K830 154 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 PEAR1Q5VY43 1037 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-201ENST00000345617 TMEM52Q8NDY8 209 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 TRBV6-7A0A0A0MS04 114 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 C5orf67F2Z3F1 127 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 ZXDCQ2QGD7 858 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-201ENST00000345617 DEFB124Q8NES8 71 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 RNF126Q9BV68 326 aa16.26■□□□□ 0.19
HDAC4-201ENST00000345617 CEACAM1P13688 526 aa16.25■□□□□ 0.19
HDAC4-201ENST00000345617 RNF125Q96EQ8 232 aa16.25■□□□□ 0.19
HDAC4-201ENST00000345617 RSPO3Q9BXY4 272 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-201ENST00000345617 JPT2Q9H910 190 aa16.25■□□□□ 0.19
HDAC4-201ENST00000345617 F8W1H4 67 aa16.25■□□□□ 0.19
HDAC4-201ENST00000345617 TBX6O95947 436 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-201ENST00000345617 GPHA2Q96T91 129 aa16.25■□□□□ 0.19
HDAC4-201ENST00000345617 PTPRQQ9UMZ3 2332 aa16.25■□□□□ 0.19
HDAC4-201ENST00000345617 ATXN7O15265 892 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-201ENST00000345617 CEP192Q8TEP8 1941 aa16.25■□□□□ 0.19
HDAC4-201ENST00000345617 MLNRO43193 412 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms