RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 ATP5IP56385 69 aaPredicted RBP10.34□□□□□ -0.75
CLK3-201ENST00000345005 ARF6P62330 175 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 CLEC12BQ2HXU8 276 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 SPINK9Q5DT21 86 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 CYB5R2Q6BCY4 276 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 PNKDQ8N490 385 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 KIR3DL3Q8N743 410 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 OR5T1Q8NG75 326 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 C11orf52Q96A22 123 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 HARBI1Q96MB7 349 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 GNB1LQ9BYB4 327 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 NPVFQ9HCQ7 196 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 HEYLQ9NQ87 328 aaPredicted RBP10.34□□□□□ -0.75
CLK3-201ENST00000345005 ZNF257Q9Y2Q1 563 aa10.34□□□□□ -0.75
CLK3-201ENST00000345005 ENSAO43768 121 aaKnown RBP10.33□□□□□ -0.76
CLK3-201ENST00000345005 IGHV4-39P01824 125 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 PRTN3P24158 256 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 COX7A1P24310 79 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 RPS16P62249 146 aaKnown RBP10.33□□□□□ -0.76
CLK3-201ENST00000345005 OR5AU1Q8NGC0 362 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 VSTM2AQ8TAG5 236 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 ORAOV1Q8WV07 137 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 LPAR2Q9HBW0 351 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 ENY2Q9NPA8 101 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 OR51B2Q9Y5P1 312 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 INSIG2Q9Y5U4 225 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 OR10J4P0C629 311 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 SAA1P0DJI8 122 aaPredicted RBP10.33□□□□□ -0.76
CLK3-201ENST00000345005 VDAC2P45880 294 aaPredicted RBP10.33□□□□□ -0.76
CLK3-201ENST00000345005 LGALS7P47929 136 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 RPS20P60866 119 aaKnown RBP10.33□□□□□ -0.76
CLK3-201ENST00000345005 RPEL1Q2QD12 228 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 OR11H6Q8NGC7 330 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 OR4A5Q8NH83 315 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 C19orf24Q9BVV8 132 aa10.33□□□□□ -0.76
CLK3-201ENST00000345005 WNK2Q9Y3S1 2297 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 REG1AP05451 166 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 ARL14EPLP0DKL9 152 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 USF1P22415 310 aaPredicted RBP10.32□□□□□ -0.76
CLK3-201ENST00000345005 ADMP35318 185 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 ATP5G3P48201 142 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 DLX1P56177 255 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 DMRTA1Q5VZB9 504 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 ZNF705AQ6ZN79 300 aaPredicted RBP10.32□□□□□ -0.76
CLK3-201ENST00000345005 TMEM256Q8N2U0 113 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 OR4B1Q8NGF8 309 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 OR4P4Q8NGL7 312 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 RPEQ96AT9 228 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 VAMP8Q9BV40 100 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 BPESC1Q9GZL8 116 aa10.32□□□□□ -0.76
CLK3-201ENST00000345005 CHTOPQ9Y3Y2 248 aaKnown RBP10.32□□□□□ -0.76
CLK3-201ENST00000345005 IGHV1-3A0A0C4DH29 117 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 LY6LH3BQJ8 138 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 COX6B1P14854 86 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 ZFP36P26651 326 aaKnown RBP10.31□□□□□ -0.76
CLK3-201ENST00000345005 CEACAM3P40198 252 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 RPL29P47914 159 aaKnown RBP10.31□□□□□ -0.76
CLK3-201ENST00000345005 UBE2G2P60604 165 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 LMO4P61968 165 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 VMA21Q3ZAQ7 101 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 OR10J3Q5JRS4 329 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 LEMD1Q68G75 181 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 TREML4Q6UXN2 200 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 BAGE3Q86Y29 109 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 BAGE2Q86Y30 109 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 SIGLECL1Q8N7X8 197 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 OR5B3Q8NH48 314 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 OCC1Q8TAD7 63 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 MRPL18Q9H0U6 180 aaKnown RBP10.31□□□□□ -0.76
CLK3-201ENST00000345005 TMEM167BQ9NRX6 74 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 AURKAIP1Q9NWT8 199 aaPredicted RBP10.31□□□□□ -0.76
CLK3-201ENST00000345005 ZNF586Q9NXT0 402 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 HECTD1Q9ULT8 2610 aa10.31□□□□□ -0.76
CLK3-201ENST00000345005 OR5G3P0C626 314 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 HTR1DP28221 377 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 GCHFRP30047 84 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 LGALS4P56470 323 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 RBX1P62877 108 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 SRSF1Q07955 248 aaKnown RBP eCLIP10.3□□□□□ -0.76
CLK3-201ENST00000345005 TEPPQ6URK8 271 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 TOMM20LQ6UXN7 152 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 MOB3BQ86TA1 216 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 TMEM167AQ8TBQ9 72 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 GGTLC1Q9BX51 225 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 SAMD10Q9BYL1 202 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 DPM3Q9P2X0 92 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 TEX50A0A1B0GTY4 177 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 NDUFS8O00217 210 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 FCN1O00602 326 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 IGLV2-23P01705 113 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 RPL8P62917 257 aaKnown RBP10.3□□□□□ -0.76
CLK3-201ENST00000345005 PRCDQ00LT1 54 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 PRB3Q04118 309 aaPredicted RBP10.3□□□□□ -0.76
CLK3-201ENST00000345005 SVIPQ8NHG7 77 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 FAM168AQ92567 244 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 RNF2Q99496 336 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 MGST2Q99735 147 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 PIMREGQ9BSJ6 248 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 HINT2Q9BX68 163 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 COMMD5Q9GZQ3 224 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms