RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 OR4C46A6NHA9 309 aa10.69□□□□□ -0.7
HMGN3-202ENST00000344726 ANXA3P12429 323 aa10.69□□□□□ -0.7
HMGN3-202ENST00000344726 NPY1RP25929 384 aa10.69□□□□□ -0.7
HMGN3-202ENST00000344726 ZNF124Q15973 351 aa10.69□□□□□ -0.7
HMGN3-202ENST00000344726 SPANXN2Q5MJ10 180 aa10.69□□□□□ -0.7
HMGN3-202ENST00000344726 DEDD2Q8WXF8 326 aa10.69□□□□□ -0.7
HMGN3-202ENST00000344726 SLC25A21Q9BQT8 299 aaPredicted RBP10.69□□□□□ -0.7
HMGN3-202ENST00000344726 RBKSQ9H477 322 aa10.69□□□□□ -0.7
HMGN3-202ENST00000344726 PITX3O75364 302 aa10.68□□□□□ -0.7
HMGN3-202ENST00000344726 IGLC1P0CG04 106 aa10.68□□□□□ -0.7
HMGN3-202ENST00000344726 TFPI2P48307 235 aa10.68□□□□□ -0.7
HMGN3-202ENST00000344726 RND2P52198 227 aa10.68□□□□□ -0.7
HMGN3-202ENST00000344726 SRPXP78539 464 aa10.68□□□□□ -0.7
HMGN3-202ENST00000344726 PPP1R1AQ13522 171 aa10.68□□□□□ -0.7
HMGN3-202ENST00000344726 TCF24Q7RTU0 167 aa10.68□□□□□ -0.7
HMGN3-202ENST00000344726 APRG1Q8IVJ8 170 aa10.68□□□□□ -0.7
HMGN3-202ENST00000344726 GBGT1Q8N5D6 347 aa10.68□□□□□ -0.7
HMGN3-202ENST00000344726 RNASEH2CQ8TDP1 164 aaKnown RBP10.68□□□□□ -0.7
HMGN3-202ENST00000344726 DTD1Q8TEA8 209 aa10.68□□□□□ -0.7
HMGN3-202ENST00000344726 OVOL2Q9BRP0 275 aa10.68□□□□□ -0.7
HMGN3-202ENST00000344726 RPS10-NUDT3A0A1W2PQS6 291 aa10.67□□□□□ -0.7
HMGN3-202ENST00000344726 DFFBO76075 338 aa10.67□□□□□ -0.7
HMGN3-202ENST00000344726 SFT2D2O95562 160 aa10.67□□□□□ -0.7
HMGN3-202ENST00000344726 VAMP1P23763 118 aa10.67□□□□□ -0.7
HMGN3-202ENST00000344726 LRTM2Q8N967 370 aa10.67□□□□□ -0.7
HMGN3-202ENST00000344726 DUXBA0A1W2PPF3 345 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 IFNA10P01566 189 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 SLC25A4P12235 298 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 CRYBB3P26998 211 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 OR10J1P30954 320 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 RBMS2Q15434 407 aaKnown RBP10.66□□□□□ -0.7
HMGN3-202ENST00000344726 CENPSQ8N2Z9 138 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 OR1S2Q8NGQ3 325 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 OR1S1Q8NH92 325 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 NPIPB3Q92617 1050 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 MS4A6AQ9H2W1 248 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 MAP6D1Q9H9H5 199 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 CACFD1Q9UGQ2 172 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 U3KQ87 197 aa10.66□□□□□ -0.7
HMGN3-202ENST00000344726 TRAV30A0A087WSZ9 112 aa10.65□□□□□ -0.7
HMGN3-202ENST00000344726 RPL35AP18077 110 aaKnown RBP10.65□□□□□ -0.7
HMGN3-202ENST00000344726 NPPCP23582 126 aa10.65□□□□□ -0.7
HMGN3-202ENST00000344726 BTCP35070 178 aa10.65□□□□□ -0.7
HMGN3-202ENST00000344726 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.7
HMGN3-202ENST00000344726 FAM24BQ8N5W8 94 aa10.65□□□□□ -0.7
HMGN3-202ENST00000344726 ACY3Q96HD9 319 aa10.65□□□□□ -0.7
HMGN3-202ENST00000344726 FLVCR2Q9UPI3 526 aa10.65□□□□□ -0.7
HMGN3-202ENST00000344726 LINC00854A0A1B0GVQ3 168 aa10.64□□□□□ -0.71
HMGN3-202ENST00000344726 NDUFB6O95139 128 aa10.64□□□□□ -0.71
HMGN3-202ENST00000344726 BMI1P35226 326 aa10.64□□□□□ -0.71
HMGN3-202ENST00000344726 YPEL3P61236 119 aaPredicted RBP10.64□□□□□ -0.71
HMGN3-202ENST00000344726 EWSR1Q01844 656 aaKnown RBP eCLIP10.64□□□□□ -0.71
HMGN3-202ENST00000344726 DEFB135Q30KP9 77 aa10.64□□□□□ -0.71
HMGN3-202ENST00000344726 TRIQKQ629K1 86 aa10.64□□□□□ -0.71
HMGN3-202ENST00000344726 ETFRF1Q6IPR1 90 aa10.64□□□□□ -0.71
HMGN3-202ENST00000344726 METTL26Q96S19 204 aa10.64□□□□□ -0.71
HMGN3-202ENST00000344726 U3KQE9 123 aa10.64□□□□□ -0.71
HMGN3-202ENST00000344726 BIRC6Q9NR09 4857 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 C9orf170A2RU37 121 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 NAP1L6A6NFF2 107 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 SCGB2A1O75556 95 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 CD5P06127 495 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 HOXB5P09067 269 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 IAPPP10997 89 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 SLC25A6P12236 298 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 P2RY1P47900 373 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 APOC4P55056 127 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 USF2Q15853 346 aaPredicted RBP10.63□□□□□ -0.71
HMGN3-202ENST00000344726 GGNBP1Q5YKI7 109 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 NOXA1Q86UR1 476 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 TMED3Q9Y3Q3 217 aa10.63□□□□□ -0.71
HMGN3-202ENST00000344726 IGKV1D-37A0A075B6S9 117 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 PIGBOS1A0A0B4J2F0 54 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 KIR2DL5BA0A0G2JN68 375 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 KIR2DL5BA0A0G2JPC4 375 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 A0A1W2PS18 150 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 DNASE2O00115 360 aaPredicted RBP10.62□□□□□ -0.71
HMGN3-202ENST00000344726 IFNA4P05014 189 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 IL7P13232 177 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 INPP1P49441 399 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 UBE2MP61081 183 aaKnown RBP10.62□□□□□ -0.71
HMGN3-202ENST00000344726 RPL11P62913 178 aaKnown RBP10.62□□□□□ -0.71
HMGN3-202ENST00000344726 PAFAH1B2P68402 229 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 GAMTQ14353 236 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 LCE2AQ5TA79 106 aaPredicted RBP10.62□□□□□ -0.71
HMGN3-202ENST00000344726 Q6ZWC4 215 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 KIR2DL5AQ8N109 375 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 KIR2DL5BQ8NHK3 375 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 Q8WTZ3 238 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 MAGT1Q9H0U3 335 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 TMEM231Q9H6L2 316 aa10.62□□□□□ -0.71
HMGN3-202ENST00000344726 TRAV2A0A0B4J234 112 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 MPTX1A8MV57 137 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 FAM90A26D6RGX4 464 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 K7EQG2 157 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 UBE2CO00762 179 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 SPRY2O43597 315 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 ADAP1O75689 374 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 TOMM40O96008 361 aa10.61□□□□□ -0.71
HMGN3-202ENST00000344726 IL4P05112 153 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms