RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 FNDC4Q9H6D8 234 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-201ENST00000344376 PUS1Q9Y606 427 aaKnown RBP eCLIP12.01□□□□□ -0.49
ATG4B-201ENST00000344376 TRAV30A0A087WSZ9 112 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 LOC102724200A0A096LPH7 203 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-201ENST00000344376 IGHV3-49A0A0A0MS15 119 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 INMT-MINDY4F8WBC2 141 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 CCNKO75909 580 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 CD5P06127 495 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 SLC25A4P12235 298 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 NPY1RP25929 384 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 ETFRF1Q6IPR1 90 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 ZNF414Q96IQ9 312 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 RNF2Q99496 336 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 A0A1B0GU03 582 aa12□□□□□ -0.49
ATG4B-201ENST00000344376 RBMS2Q15434 407 aaKnown RBP12□□□□□ -0.49
ATG4B-201ENST00000344376 OR1S1Q8NH92 325 aa12□□□□□ -0.49
ATG4B-201ENST00000344376 DTD1Q8TEA8 209 aa12□□□□□ -0.49
ATG4B-201ENST00000344376 TMEM231Q9H6L2 316 aa12□□□□□ -0.49
ATG4B-201ENST00000344376 HSPB7Q9UBY9 170 aa12□□□□□ -0.49
ATG4B-201ENST00000344376 IFNA10P01566 189 aa11.99□□□□□ -0.49
ATG4B-201ENST00000344376 LYL1P12980 280 aa11.99□□□□□ -0.49
ATG4B-201ENST00000344376 ZFAND3Q9H8U3 227 aa11.99□□□□□ -0.49
ATG4B-201ENST00000344376 RETNQ9HD89 108 aa11.99□□□□□ -0.49
ATG4B-201ENST00000344376 UBQLN2Q9UHD9 624 aa11.99□□□□□ -0.49
ATG4B-201ENST00000344376 U3KQ87 197 aa11.99□□□□□ -0.49
ATG4B-201ENST00000344376 IGHV3OR16-13A0A075B7E8 117 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 IGHV3-74A0A0B4J1X5 117 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 C7orf66A4D0T2 115 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 TCRBP04435 133 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 S100A1P23297 94 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 CMC4P56277 68 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-201ENST00000344376 PAFAH1B2P68402 229 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 MLANAQ16655 118 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 OR1S2Q8NGQ3 325 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 NARS2Q96I59 477 aaKnown RBP11.98□□□□□ -0.49
ATG4B-201ENST00000344376 METTL26Q96S19 204 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 FAM110AQ9BQ89 295 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 EDA2RQ9HAV5 297 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 MRPL36Q9P0J6 103 aaKnown RBP11.98□□□□□ -0.49
ATG4B-201ENST00000344376 ALG5Q9Y673 324 aa11.98□□□□□ -0.49
ATG4B-201ENST00000344376 NPPCP23582 126 aa11.97□□□□□ -0.49
ATG4B-201ENST00000344376 RND2P52198 227 aa11.97□□□□□ -0.49
ATG4B-201ENST00000344376 IFITM2Q01629 132 aa11.97□□□□□ -0.49
ATG4B-201ENST00000344376 TCF24Q7RTU0 167 aa11.97□□□□□ -0.49
ATG4B-201ENST00000344376 LRTM2Q8N967 370 aa11.97□□□□□ -0.49
ATG4B-201ENST00000344376 ST8SIA2Q92186 375 aa11.97□□□□□ -0.49
ATG4B-201ENST00000344376 RBKSQ9H477 322 aa11.97□□□□□ -0.49
ATG4B-201ENST00000344376 IGKV3-7A0A075B6H7 116 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 A0A1W2PS18 150 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 PRAF2O60831 178 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 SFT2D2O95562 160 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 TFPI2P48307 235 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 APOC4P55056 127 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 ATP5IP56385 69 aaPredicted RBP11.96□□□□□ -0.49
ATG4B-201ENST00000344376 UBE2MP61081 183 aaKnown RBP11.96□□□□□ -0.49
ATG4B-201ENST00000344376 PPP1R1AQ13522 171 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 ODF3L2Q3SX64 289 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 TIGITQ495A1 244 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 PRSS54Q6PEW0 395 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 ST6GAL2Q96JF0 529 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 VSIRQ9H7M9 311 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 TMED3Q9Y3Q3 217 aa11.96□□□□□ -0.49
ATG4B-201ENST00000344376 IGKV1-17P01599 117 aa11.96□□□□□ -0.5
ATG4B-201ENST00000344376 SLC25A6P12236 298 aa11.96□□□□□ -0.5
ATG4B-201ENST00000344376 OR10J1P30954 320 aa11.96□□□□□ -0.5
ATG4B-201ENST00000344376 RRAS2P62070 204 aaPredicted RBP11.96□□□□□ -0.5
ATG4B-201ENST00000344376 RPL11P62913 178 aaKnown RBP11.96□□□□□ -0.5
ATG4B-201ENST00000344376 CASC10Q5T4H9 136 aa11.96□□□□□ -0.5
ATG4B-201ENST00000344376 TCTE3Q8IZS6 198 aa11.96□□□□□ -0.5
ATG4B-201ENST00000344376 Q8WTZ3 238 aa11.96□□□□□ -0.5
ATG4B-201ENST00000344376 NUDT15Q9NV35 164 aa11.96□□□□□ -0.5
ATG4B-201ENST00000344376 DNASE2O00115 360 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-201ENST00000344376 MED6O75586 246 aa11.95□□□□□ -0.5
ATG4B-201ENST00000344376 IFNA4P05014 189 aa11.95□□□□□ -0.5
ATG4B-201ENST00000344376 H2AFB2P0C5Z0 115 aa11.95□□□□□ -0.5
ATG4B-201ENST00000344376 IGLC1P0CG04 106 aa11.95□□□□□ -0.5
ATG4B-201ENST00000344376 FAM90A2PQ658T7 463 aa11.95□□□□□ -0.5
ATG4B-201ENST00000344376 TMEM170AQ8WVE7 144 aa11.95□□□□□ -0.5
ATG4B-201ENST00000344376 ACY3Q96HD9 319 aa11.95□□□□□ -0.5
ATG4B-201ENST00000344376 GRAMD2BQ96HH9 432 aa11.95□□□□□ -0.5
ATG4B-201ENST00000344376 DNAH7Q8WXX0 4024 aa11.95□□□□□ -0.5
ATG4B-201ENST00000344376 IGHV3-66A0A0C4DH42 116 aa11.94□□□□□ -0.5
ATG4B-201ENST00000344376 FAM90A26D6RGX4 464 aa11.94□□□□□ -0.5
ATG4B-201ENST00000344376 NDUFB6O95139 128 aa11.94□□□□□ -0.5
ATG4B-201ENST00000344376 APOHP02749 345 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-201ENST00000344376 YPEL3P61236 119 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-201ENST00000344376 GBGT1Q8N5D6 347 aa11.94□□□□□ -0.5
ATG4B-201ENST00000344376 NPIPB3Q92617 1050 aa11.94□□□□□ -0.5
ATG4B-201ENST00000344376 UBE2CO00762 179 aa11.93□□□□□ -0.5
ATG4B-201ENST00000344376 PITX3O75364 302 aa11.93□□□□□ -0.5
ATG4B-201ENST00000344376 DFFBO76075 338 aa11.93□□□□□ -0.5
ATG4B-201ENST00000344376 CRYBB3P26998 211 aa11.93□□□□□ -0.5
ATG4B-201ENST00000344376 RAB11AP62491 216 aa11.93□□□□□ -0.5
ATG4B-201ENST00000344376 ZFP69Q49AA0 526 aa11.93□□□□□ -0.5
ATG4B-201ENST00000344376 C20orf85Q9H1P6 137 aa11.93□□□□□ -0.5
ATG4B-201ENST00000344376 NBEAL2Q6ZNJ1 2754 aa11.92□□□□□ -0.5
ATG4B-201ENST00000344376 TRAV2A0A0B4J234 112 aa11.92□□□□□ -0.5
ATG4B-201ENST00000344376 KIR2DL5BA0A0G2JN68 375 aa11.92□□□□□ -0.5
ATG4B-201ENST00000344376 KIR2DL5BA0A0G2JPC4 375 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms