RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 SPAARA0A1B0GVQ0 90 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 A8MWL6 223 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 GGTLC3B5MD39 225 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 CDX4O14627 284 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-201ENST00000343524 CHEK1O14757 476 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 KLF7O75840 302 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-201ENST00000343524 MYF5P13349 255 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 NTF4P34130 210 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 VDAC2P45880 294 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-201ENST00000343524 RPS16P62249 146 aaKnown RBP6.67□□□□□ -1.34
ATG4A-201ENST00000343524 GNG3P63215 75 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 SSBP2P81877 361 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-201ENST00000343524 GUSBP1Q15486 140 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 PRAMEF5Q5TYX0 476 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 GDF5OSQ5U4N7 250 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 PRAMEF6Q5VXH4 476 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 SLC23A3Q6PIS1 610 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 ZADH2Q8N4Q0 377 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 ATP6V0E2Q8NHE4 81 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 C8orf46Q8TAG6 207 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 SSMEM1Q8WWF3 244 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 HIGD1BQ9P298 99 aa6.67□□□□□ -1.34
ATG4A-201ENST00000343524 KIR2DL1P43626 348 aaPredicted RBP6.66□□□□□ -1.34
ATG4A-201ENST00000343524 SPATA31B1PQ5VZV4 182 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 Q6ZS92 163 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 OR13H1Q8NG92 308 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 RAB37Q96AX2 223 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 PRORYQ9H606 182 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 AP5S1Q9NUS5 200 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 ERG28Q9UKR5 140 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 HILPDAQ9Y5L2 63 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 IGHV5-51A0A0C4DH38 117 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 A0A1B0GW15 77 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 TMEM30CPA0ZSE6 113 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 C17orf98A8MV24 154 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 J3QT63 122 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 ZFAND5O76080 213 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 C8orf88P0DMB2 117 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 B4GALT1P15291 398 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 IGFBP2P18065 325 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 CA6P23280 308 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 KIR2DS2P43631 304 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 ATP5IP56385 69 aaPredicted RBP6.66□□□□□ -1.34
ATG4A-201ENST00000343524 KLRD1Q13241 179 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 MIR17HGQ75NE6 70 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 PIP4P1Q86T03 277 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 NABP2Q9BQ15 211 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 FAM110AQ9BQ89 295 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF747Q9BV97 191 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 SSBP3Q9BWW4 388 aaPredicted RBP6.66□□□□□ -1.34
ATG4A-201ENST00000343524 RPP21Q9H633 154 aaKnown RBP6.66□□□□□ -1.34
ATG4A-201ENST00000343524 ENY2Q9NPA8 101 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 OCIAD1Q9NX40 245 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 POLDIP2Q9Y2S7 368 aa6.66□□□□□ -1.34
ATG4A-201ENST00000343524 APC2O95996 2303 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 TNRC6AQ8NDV7 1962 aaKnown RBP6.65□□□□□ -1.34
ATG4A-201ENST00000343524 ACACAQ13085 2346 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 SPTY2D1-AS1A0A0U1RR47 76 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 A0A1W2PRD5 423 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 A0A1W2PRF3 423 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 A0A1W2PRM7 423 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 OOEPA6NGQ2 149 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 SH2D7A6NKC9 451 aaPredicted RBP6.65□□□□□ -1.34
ATG4A-201ENST00000343524 PEX7O00628 323 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 SYNGR1O43759 233 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 FOXH1O75593 365 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 DUTP33316 252 aaKnown RBP6.65□□□□□ -1.34
ATG4A-201ENST00000343524 ERVK11-1P61568 191 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 RPL30P62888 115 aaKnown RBP6.65□□□□□ -1.34
ATG4A-201ENST00000343524 SPINK9Q5DT21 86 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF542PQ5EBM4 170 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 TMEM196Q5HYL7 178 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 Q6P435 159 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 TRAT1Q6PIZ9 186 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 RBPMS2Q6ZRY4 209 aaKnown RBP6.65□□□□□ -1.34
ATG4A-201ENST00000343524 C8orf86Q6ZUL3 223 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 LINC00173Q6ZV60 143 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 RPRMLQ8N4K4 120 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 NFAM1Q8NET5 270 aaPredicted RBP6.65□□□□□ -1.34
ATG4A-201ENST00000343524 OR9G1Q8NH87 305 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 PIFOQ8TCI5 191 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 GTSF1Q8WW33 167 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 TMEM190Q8WZ59 177 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 ZC2HC1AQ96GY0 325 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 ZNF492Q9P255 531 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 AMMECR1Q9Y4X0 333 aaPredicted RBP6.65□□□□□ -1.34
ATG4A-201ENST00000343524 SPAG17Q6Q759 2223 aa6.65□□□□□ -1.34
ATG4A-201ENST00000343524 SHISA9B4DS77 424 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 SLC25A17O43808 307 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 GABRG2P18507 467 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 FCGR2BP31994 310 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-201ENST00000343524 DSCR4P56555 118 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-201ENST00000343524 UBE2L3P68036 154 aaKnown RBP6.64□□□□□ -1.35
ATG4A-201ENST00000343524 GAGE5Q13069 117 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 GAGE6Q13070 117 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 SLC22A18ASQ8N1D0 253 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 ABCA12Q86UK0 2595 aa6.64□□□□□ -1.35
ATG4A-201ENST00000343524 NCOA6Q14686 2063 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-201ENST00000343524 URB1O60287 2271 aaKnown RBP6.64□□□□□ -1.35
ATG4A-201ENST00000343524 PCNX2A6NKB5 2137 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms