RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 FMC1Q96HJ9 113 aa12.8□□□□□ -0.36
CARMIL3-201ENST00000342740 IMMP2LQ96T52 175 aa12.8□□□□□ -0.36
CARMIL3-201ENST00000342740 LINC00527Q9UJ94 153 aa12.8□□□□□ -0.36
CARMIL3-201ENST00000342740 IGLV3-1P01715 115 aa12.8□□□□□ -0.36
CARMIL3-201ENST00000342740 ZNF600Q6ZNG1 722 aa12.8□□□□□ -0.36
CARMIL3-201ENST00000342740 MED13Q9UHV7 2174 aa12.8□□□□□ -0.36
CARMIL3-201ENST00000342740 RNF151Q2KHN1 245 aa12.8□□□□□ -0.36
CARMIL3-201ENST00000342740 ZFP30Q9Y2G7 519 aa12.8□□□□□ -0.36
CARMIL3-201ENST00000342740 IGKV1-16P04430 117 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 STAG3L2P0CL84 134 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 STAG3L3P0CL85 134 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 RNASE7Q9H1E1 156 aaKnown RBP12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 LIME1Q9H400 295 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 DCAF16Q9NXF7 216 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 TRAV1-1A0A0B4J248 108 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 IGLV1-44P01699 117 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 TCTAP57738 103 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 ERVK11-1P61568 191 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 NPFFR1Q9GZQ6 430 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 OTORQ9NRC9 128 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 EPDR1Q9UM22 224 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 WDR87Q6ZQQ6 2873 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 A0A1B0GUT8 65 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 OR4C5Q8NGB2 326 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 ATG101Q9BSB4 218 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 TRAV5A0A0B4J249 113 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 BUB1B-PAK6H3BSN5 160 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 GGCTO75223 188 aaKnown RBP12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 LYL1P12980 280 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 RNF5Q99942 180 aa12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 RPP21Q9H633 154 aaKnown RBP12.79□□□□□ -0.36
CARMIL3-201ENST00000342740 GATA4P43694 442 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 OCC1Q8TAD7 63 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 MUC21A0A0G2JKD1 596 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 MUC21A0A140T8X8 626 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 OOSP1A8MZH6 123 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 C3orf36Q3SXR2 165 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 MUC21Q5SSG8 566 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 MINOS1Q5TGZ0 78 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 TMEM183AQ8IXX5 376 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 CIARTQ8N365 385 aaPredicted RBP12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 MINOS1-NBL1R4GNA1 71 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 SEPSECSQ9HD40 501 aaKnown RBP12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 FREM1Q5H8C1 2179 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 C15orf62A8K5M9 175 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 J3QR89 54 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 NMUP48645 174 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 PMCHL1Q16048 86 aa12.78□□□□□ -0.36
CARMIL3-201ENST00000342740 FAM74A4Q5TZK3 123 aa12.77□□□□□ -0.36
CARMIL3-201ENST00000342740 FAM53AQ6NSI3 398 aaPredicted RBP12.77□□□□□ -0.36
CARMIL3-201ENST00000342740 OR10AG1Q8NH19 301 aa12.77□□□□□ -0.36
CARMIL3-201ENST00000342740 MGST2Q99735 147 aa12.77□□□□□ -0.36
CARMIL3-201ENST00000342740 COL25A1Q9BXS0 654 aaPredicted RBP12.77□□□□□ -0.36
CARMIL3-201ENST00000342740 M0R1W7 72 aa12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 TCF15Q12870 199 aa12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 SRSF9Q13242 221 aaKnown RBP eCLIP12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 KLF17Q5JT82 389 aaPredicted RBP12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 TMEM136Q6ZRR5 245 aa12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 LINC00518Q8N0U6 118 aa12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 SPATA31B1PQ5VZV4 182 aa12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 TMEM219Q86XT9 240 aa12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 C8orf46Q8TAG6 207 aa12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 AP5S1Q9NUS5 200 aa12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 ZNRD1Q9P1U0 126 aa12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 SIGLEC9Q9Y336 463 aa12.77□□□□□ -0.37
CARMIL3-201ENST00000342740 HIGD1CA8MV81 97 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 FOLR2P14207 255 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 C5orf64Q2M2E5 130 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 OR4X2Q8NGF9 303 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 BPESC1Q9GZL8 116 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 PRSS22Q9GZN4 317 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 TRBV20OR9-2A0A075B6H5 130 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 ITGB1BP1O14713 200 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 NUDT3O95989 172 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 PSG1P11464 419 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 RRN3P1Q2M238 152 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 M0R381 172 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 DLX1P56177 255 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 WIPF3A6NGB9 483 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 LHFPL4Q7Z7J7 247 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 ZNF502Q8TBZ5 544 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 YAE1D1Q9NRH1 226 aa12.76□□□□□ -0.37
CARMIL3-201ENST00000342740 DSCR9P59020 149 aa12.75□□□□□ -0.37
CARMIL3-201ENST00000342740 TMEM155Q4W5P6 130 aa12.75□□□□□ -0.37
CARMIL3-201ENST00000342740 KIR3DL3Q8N743 410 aa12.75□□□□□ -0.37
CARMIL3-201ENST00000342740 VPS25Q9BRG1 176 aa12.75□□□□□ -0.37
CARMIL3-201ENST00000342740 REG4Q9BYZ8 158 aa12.75□□□□□ -0.37
CARMIL3-201ENST00000342740 BRD3OSQ6XYD6 125 aa12.75□□□□□ -0.37
CARMIL3-201ENST00000342740 C15orf32Q32M92 178 aa12.75□□□□□ -0.37
CARMIL3-201ENST00000342740 Q8TCH9 128 aa12.75□□□□□ -0.37
CARMIL3-201ENST00000342740 IGLV3-9A0A075B6K5 115 aa12.74□□□□□ -0.37
CARMIL3-201ENST00000342740 TRAV9-1A0A075B6T8 112 aa12.74□□□□□ -0.37
CARMIL3-201ENST00000342740 A0A1B0GWJ7 208 aa12.74□□□□□ -0.37
CARMIL3-201ENST00000342740 B4DSR2 109 aa12.74□□□□□ -0.37
CARMIL3-201ENST00000342740 NPIPB6E9PJ23 425 aa12.74□□□□□ -0.37
CARMIL3-201ENST00000342740 PRTN3P24158 256 aa12.74□□□□□ -0.37
CARMIL3-201ENST00000342740 AGMATQ9BSE5 352 aa12.74□□□□□ -0.37
CARMIL3-201ENST00000342740 KLK15Q9H2R5 256 aa12.74□□□□□ -0.37
CARMIL3-201ENST00000342740 CBY3A6NI87 242 aa12.74□□□□□ -0.37
CARMIL3-201ENST00000342740 C9JCJ5 164 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms