RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 DTX2Q86UW9 622 aa11.96□□□□□ -0.49
PBX3-201ENST00000342287 RAI1Q7Z5J4 1906 aaPredicted RBP11.96□□□□□ -0.5
PBX3-201ENST00000342287 RPL31P62899 125 aaKnown RBP11.96□□□□□ -0.5
PBX3-201ENST00000342287 HERV-K104P63124 156 aa11.96□□□□□ -0.5
PBX3-201ENST00000342287 ZNF90Q03938 601 aa11.96□□□□□ -0.5
PBX3-201ENST00000342287 Q0VG73 95 aa11.96□□□□□ -0.5
PBX3-201ENST00000342287 PMCHL1Q16048 86 aa11.96□□□□□ -0.5
PBX3-201ENST00000342287 ABHD14BQ96IU4 210 aa11.96□□□□□ -0.5
PBX3-201ENST00000342287 BBC3Q96PG8 261 aaPredicted RBP11.96□□□□□ -0.5
PBX3-201ENST00000342287 SPIN2AQ99865 258 aa11.96□□□□□ -0.5
PBX3-201ENST00000342287 SPIN2BQ9BPZ2 258 aa11.96□□□□□ -0.5
PBX3-201ENST00000342287 SS18L2Q9UHA2 77 aa11.96□□□□□ -0.5
PBX3-201ENST00000342287 PRB1P04280 392 aa11.95□□□□□ -0.5
PBX3-201ENST00000342287 FRMD6-AS1P0C7T7 363 aa11.95□□□□□ -0.5
PBX3-201ENST00000342287 RPL24P83731 157 aaKnown RBP11.95□□□□□ -0.5
PBX3-201ENST00000342287 TMEM30BQ3MIR4 351 aa11.95□□□□□ -0.5
PBX3-201ENST00000342287 NEU4Q8WWR8 484 aaPredicted RBP11.95□□□□□ -0.5
PBX3-201ENST00000342287 CACNG8Q8WXS5 425 aa11.95□□□□□ -0.5
PBX3-201ENST00000342287 WDR61Q9GZS3 305 aaKnown RBP11.95□□□□□ -0.5
PBX3-201ENST00000342287 GEMIN7Q9H840 131 aaKnown RBP11.95□□□□□ -0.5
PBX3-201ENST00000342287 IDI2-AS1Q9NZ38 188 aa11.95□□□□□ -0.5
PBX3-201ENST00000342287 SNURFLB1AK76 121 aa11.95□□□□□ -0.5
PBX3-201ENST00000342287 VENTXO95231 258 aa11.95□□□□□ -0.5
PBX3-201ENST00000342287 CATR1Q13166 79 aa11.95□□□□□ -0.5
PBX3-201ENST00000342287 EIF4EBP1Q13541 118 aaPredicted RBP11.95□□□□□ -0.5
PBX3-201ENST00000342287 GTF2H5Q6ZYL4 71 aa11.95□□□□□ -0.5
PBX3-201ENST00000342287 C5orf30Q96GV9 206 aa11.95□□□□□ -0.5
PBX3-201ENST00000342287 KCNS1Q96KK3 526 aa11.95□□□□□ -0.5
PBX3-201ENST00000342287 FAM231BA6NCW3 169 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 C17orf112F2Z3M2 114 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 GPR12P47775 334 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 NMSQ5H8A3 153 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 OR4A5Q8NH83 315 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 CTSZQ9UBR2 303 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 CFAP46Q8IYW2 2715 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 TANC2Q9HCD6 1990 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 A0A1W2PPR1 153 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 ZNF324O75467 553 aaPredicted RBP11.94□□□□□ -0.5
PBX3-201ENST00000342287 FCN3O75636 299 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 ZNF585BQ52M93 769 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 ZNF841Q6ZN19 808 aa11.94□□□□□ -0.5
PBX3-201ENST00000342287 HSD17B10Q99714 261 aaKnown RBP11.94□□□□□ -0.5
PBX3-201ENST00000342287 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.93□□□□□ -0.5
PBX3-201ENST00000342287 CD5LO43866 347 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 CLDN1O95832 211 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 ZNF134P52741 427 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 TMEM200BQ69YZ2 307 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 H1FXQ92522 213 aaKnown RBP11.93□□□□□ -0.5
PBX3-201ENST00000342287 AP1S3Q96PC3 154 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 NAA38Q9BRA0 125 aaKnown RBP11.93□□□□□ -0.5
PBX3-201ENST00000342287 SLC25A22Q9H936 323 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 SPTBN1Q01082 2364 aaKnown RBP11.93□□□□□ -0.5
PBX3-201ENST00000342287 ABCA4P78363 2273 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 C7orf71A4D174 169 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 PAGE4O60829 102 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 CLEC3BP05452 202 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 THBS3P49746 956 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 RPL30P62888 115 aaKnown RBP11.93□□□□□ -0.5
PBX3-201ENST00000342287 NEGR1Q7Z3B1 354 aa11.93□□□□□ -0.5
PBX3-201ENST00000342287 MDFIC2A0A1B0GVS7 189 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 IGHV3-7P01780 117 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 C12orf54Q6X4T0 127 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 ZNF843Q8N446 348 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 LSM10Q969L4 123 aaKnown RBP11.92□□□□□ -0.5
PBX3-201ENST00000342287 NEIL1Q96FI4 390 aaPredicted RBP11.92□□□□□ -0.5
PBX3-201ENST00000342287 ZNF714Q96N38 554 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 IGKV1-39P01597 117 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 IGKV1D-39P04432 117 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 SLC25A6P12236 298 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 NPPCP23582 126 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 ZNF114Q8NC26 417 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 IFI27L2Q9H2X8 130 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 UBTD1Q9HAC8 227 aa11.92□□□□□ -0.5
PBX3-201ENST00000342287 RPUSD1Q9UJJ7 312 aaKnown RBP11.92□□□□□ -0.5
PBX3-201ENST00000342287 J3QR06 171 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 SPINK4O60575 86 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 CRYGCP07315 174 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 HSD52Q0P140 79 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 CT45A1Q5HYN5 189 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 UFSP1Q6NVU6 142 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 CT45A3Q8NHU0 189 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 LEAP2Q969E1 77 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 HINT2Q9BX68 163 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 RPP25LQ8N5L8 163 aaKnown RBP11.91□□□□□ -0.5
PBX3-201ENST00000342287 RAB1CQ92928 201 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 TIMD4Q96H15 378 aa11.91□□□□□ -0.5
PBX3-201ENST00000342287 PROP1O75360 226 aa11.9□□□□□ -0.5
PBX3-201ENST00000342287 LY6HO94772 140 aa11.9□□□□□ -0.5
PBX3-201ENST00000342287 UTF1Q5T230 341 aa11.9□□□□□ -0.5
PBX3-201ENST00000342287 C19orf35Q6ZS72 473 aa11.9□□□□□ -0.5
PBX3-201ENST00000342287 HIF1ANQ9NWT6 349 aa11.9□□□□□ -0.5
PBX3-201ENST00000342287 RALYQ9UKM9 306 aaKnown RBP11.9□□□□□ -0.5
PBX3-201ENST00000342287 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
PBX3-201ENST00000342287 LINC00473A8K010 186 aa11.9□□□□□ -0.5
PBX3-201ENST00000342287 C17orf98A8MV24 154 aa11.9□□□□□ -0.5
PBX3-201ENST00000342287 LIPFP07098 398 aa11.9□□□□□ -0.5
PBX3-201ENST00000342287 DUTP33316 252 aaKnown RBP11.9□□□□□ -0.5
PBX3-201ENST00000342287 ZNF439Q8NDP4 499 aa11.9□□□□□ -0.5
PBX3-201ENST00000342287 NAT8BQ9UHF3 227 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms