RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 LOC105371242A0A075B767 164 aa12.01□□□□□ -0.49
TPM3-208ENST00000341485 COX7A2P2O60397 106 aa12.01□□□□□ -0.49
TPM3-208ENST00000341485 IGHV4-39P01824 125 aa12.01□□□□□ -0.49
TPM3-208ENST00000341485 CRYGBP07316 175 aa12.01□□□□□ -0.49
TPM3-208ENST00000341485 RUSC1-AS1Q66K80 236 aa12.01□□□□□ -0.49
TPM3-208ENST00000341485 OR5AU1Q8NGC0 362 aa12.01□□□□□ -0.49
TPM3-208ENST00000341485 HRNRQ86YZ3 2850 aaPredicted RBP12□□□□□ -0.49
TPM3-208ENST00000341485 C22orf46C9J442 243 aa12□□□□□ -0.49
TPM3-208ENST00000341485 PRRX1P54821 245 aa12□□□□□ -0.49
TPM3-208ENST00000341485 MFAP2P55001 183 aa12□□□□□ -0.49
TPM3-208ENST00000341485 YPEL3P61236 119 aaPredicted RBP12□□□□□ -0.49
TPM3-208ENST00000341485 UBE2L3P68036 154 aaKnown RBP12□□□□□ -0.49
TPM3-208ENST00000341485 C10orf113Q5VZT2 155 aa12□□□□□ -0.49
TPM3-208ENST00000341485 PVRIGQ6DKI7 326 aa12□□□□□ -0.49
TPM3-208ENST00000341485 LY6G5BQ8NDX9 201 aa12□□□□□ -0.49
TPM3-208ENST00000341485 ZNF355PQ9NSJ1 428 aa12□□□□□ -0.49
TPM3-208ENST00000341485 MALRD1Q5VYJ5 2156 aa12□□□□□ -0.49
TPM3-208ENST00000341485 ZFYVE26Q68DK2 2539 aa12□□□□□ -0.49
TPM3-208ENST00000341485 TRAV9-1A0A075B6T8 112 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 RBP4P02753 201 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 ADMP35318 185 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 LGALS4P56470 323 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 ERVFC1-1P60608 527 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 JOSD1Q15040 202 aaPredicted RBP11.99□□□□□ -0.49
TPM3-208ENST00000341485 TNXAQ16473 311 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 C9orf152Q5JTZ5 239 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 HCP5Q6MZN7 132 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 C19orf35Q6ZS72 473 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 OR1L4Q8NGR5 311 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 IGFBPL1Q8WX77 278 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 CLEC7AQ9BXN2 247 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 BPESC1Q9GZL8 116 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 IGHV1-3A0A0C4DH29 117 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 BUB1B-PAK6H3BSN5 160 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 IGLV2-8P01709 118 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 CRYGCP07315 174 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 PYYP10082 97 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 RPL27AP46776 148 aaKnown RBP11.99□□□□□ -0.49
TPM3-208ENST00000341485 MMD2Q8IY49 270 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 OR5R1Q8NH85 324 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 IGF2BP2-AS1Q96M15 143 aa11.99□□□□□ -0.49
TPM3-208ENST00000341485 A0A1B0GUS0 222 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 GZMBP10144 247 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 COX7A1P24310 79 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 BPIFB3P59826 476 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 SELENOTP62341 195 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 RPEL1Q2QD12 228 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 MISP3Q96FF7 219 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 PAXXQ9BUH6 204 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 SIGLEC9Q9Y336 463 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 INSIG2Q9Y5U4 225 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 ZNF462Q96JM2 2506 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 DOPEY1Q5JWR5 2465 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 GCGP01275 180 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 CBLN1P23435 193 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 ARF6P62330 175 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 TIGITQ495A1 244 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 GBGT1Q8N5D6 347 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 BEND2Q8NDZ0 799 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 RNASE7Q9H1E1 156 aaKnown RBP11.98□□□□□ -0.49
TPM3-208ENST00000341485 EPG5Q9HCE0 2579 aa11.98□□□□□ -0.49
TPM3-208ENST00000341485 MOSP00540 346 aa11.97□□□□□ -0.49
TPM3-208ENST00000341485 FRMD6-AS1P0C7T7 363 aa11.97□□□□□ -0.49
TPM3-208ENST00000341485 APELAP0DMC3 54 aa11.97□□□□□ -0.49
TPM3-208ENST00000341485 COMPP49747 757 aaPredicted RBP11.97□□□□□ -0.49
TPM3-208ENST00000341485 ATP5J2P56134 94 aa11.97□□□□□ -0.49
TPM3-208ENST00000341485 TMEM18Q96B42 140 aa11.97□□□□□ -0.49
TPM3-208ENST00000341485 PIMREGQ9BSJ6 248 aa11.97□□□□□ -0.49
TPM3-208ENST00000341485 OSTCQ9NRP0 149 aa11.97□□□□□ -0.49
TPM3-208ENST00000341485 FAM209BQ5JX69 171 aa11.96□□□□□ -0.49
TPM3-208ENST00000341485 ETFRF1Q6IPR1 90 aa11.96□□□□□ -0.49
TPM3-208ENST00000341485 MRPL41Q8IXM3 137 aaKnown RBP11.96□□□□□ -0.49
TPM3-208ENST00000341485 TMEM256Q8N2U0 113 aa11.96□□□□□ -0.49
TPM3-208ENST00000341485 OR1L6Q8NGR2 347 aa11.96□□□□□ -0.49
TPM3-208ENST00000341485 FAM168AQ92567 244 aa11.96□□□□□ -0.49
TPM3-208ENST00000341485 TNFRSF19Q9NS68 423 aa11.96□□□□□ -0.49
TPM3-208ENST00000341485 LRBAP50851 2863 aa11.96□□□□□ -0.49
TPM3-208ENST00000341485 M0R1W7 72 aa11.96□□□□□ -0.5
TPM3-208ENST00000341485 ZNF329Q86UD4 541 aa11.96□□□□□ -0.5
TPM3-208ENST00000341485 OR8I2Q8N0Y5 310 aa11.96□□□□□ -0.5
TPM3-208ENST00000341485 FXYD5Q96DB9 178 aa11.96□□□□□ -0.5
TPM3-208ENST00000341485 IGHV3-21A0A0B4J1V1 117 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 TEX22C9J3V5 150 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 LY6LH3BQJ8 138 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 NUPR1O60356 82 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 FXYD3Q14802 87 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 CLEC2AQ6UVW9 174 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 LINC00305Q7Z4B0 112 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 RPEQ96AT9 228 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 LINC00479Q96M42 142 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 TRGV9Q99603 122 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 MRPL18Q9H0U6 180 aaKnown RBP11.95□□□□□ -0.5
TPM3-208ENST00000341485 AMMECR1Q9Y4X0 333 aaPredicted RBP11.95□□□□□ -0.5
TPM3-208ENST00000341485 ISLRO14498 428 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 MGST1P10620 155 aaKnown RBP11.95□□□□□ -0.5
TPM3-208ENST00000341485 ZFP36P26651 326 aaKnown RBP11.95□□□□□ -0.5
TPM3-208ENST00000341485 TAS2R60P59551 318 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 PPP1R27Q86WC6 154 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 PERPQ96FX8 193 aa11.95□□□□□ -0.5
TPM3-208ENST00000341485 PRO1933Q9H354 126 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms