RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ENKURQ8TC29 256 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 ST8SIA2Q92186 375 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 VSIRQ9H7M9 311 aa14.94□□□□□ -0.02
SYNE2-201ENST00000341472 TRAV30A0A087WSZ9 112 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 IGHV3-66A0A0C4DH42 116 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 LCE6AA0A183 80 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 SPRY2O43597 315 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 NDUFB6O95139 128 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 PTTG1O95997 202 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 BTCP35070 178 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 RGS21Q2M5E4 152 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 C2orf83Q53S99 150 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 WFDC3Q8IUB2 231 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 APRG1Q8IVJ8 170 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 LILRB2Q8N423 598 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 TMEM231Q9H6L2 316 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 ZFAND3Q9H8U3 227 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 PRR13Q9NZ81 148 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 TP53TG1Q9Y2A0 90 aa14.93□□□□□ -0.02
SYNE2-201ENST00000341472 A0A1W2PS18 150 aa14.92□□□□□ -0.02
SYNE2-201ENST00000341472 DNASE2O00115 360 aaPredicted RBP14.92□□□□□ -0.02
SYNE2-201ENST00000341472 DFFBO76075 338 aa14.92□□□□□ -0.02
SYNE2-201ENST00000341472 ANXA3P12429 323 aa14.92□□□□□ -0.02
SYNE2-201ENST00000341472 CCR6P51684 374 aa14.92□□□□□ -0.02
SYNE2-201ENST00000341472 RPL11P62913 178 aaKnown RBP14.92□□□□□ -0.02
SYNE2-201ENST00000341472 NOXA1Q86UR1 476 aa14.92□□□□□ -0.02
SYNE2-201ENST00000341472 SLC24A4Q8NFF2 622 aa14.92□□□□□ -0.02
SYNE2-201ENST00000341472 RNASEH2CQ8TDP1 164 aaKnown RBP14.92□□□□□ -0.02
SYNE2-201ENST00000341472 STARD9Q9P2P6 4700 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 A0A0B4J2A0 478 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 IGKV1-17P01599 117 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 TCRBP04435 133 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 SLC25A4P12235 298 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 SUPT4H1P63272 117 aaKnown RBP14.91□□□□□ -0.02
SYNE2-201ENST00000341472 TIGITQ495A1 244 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 NMSQ5H8A3 153 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 LYZL2Q7Z4W2 148 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 NRARPQ7Z6K4 114 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 LGI3Q8N145 548 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 METTL26Q96S19 204 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 MAP6D1Q9H9H5 199 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 SHPKQ9UHJ6 478 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 RYR2Q92736 4967 aa14.91□□□□□ -0.02
SYNE2-201ENST00000341472 NXPH3O95157 252 aa14.9□□□□□ -0.02
SYNE2-201ENST00000341472 SRPXP78539 464 aa14.9□□□□□ -0.02
SYNE2-201ENST00000341472 PRSS54Q6PEW0 395 aa14.9□□□□□ -0.02
SYNE2-201ENST00000341472 Q8WTZ3 238 aa14.9□□□□□ -0.02
SYNE2-201ENST00000341472 MS4A6AQ9H2W1 248 aa14.9□□□□□ -0.02
SYNE2-201ENST00000341472 PIGBOS1A0A0B4J2F0 54 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 NPY1RP25929 384 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 RND2P52198 227 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 SMCO1Q147U7 214 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 ZNF124Q15973 351 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 DEFB135Q30KP9 77 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 ETFRF1Q6IPR1 90 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 TMED4Q7Z7H5 227 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 OR1S2Q8NGQ3 325 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 RNF183Q96D59 192 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 NARS2Q96I59 477 aaKnown RBP14.89□□□□□ -0.03
SYNE2-201ENST00000341472 CSTL1Q9H114 145 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 U3KQ87 197 aa14.89□□□□□ -0.03
SYNE2-201ENST00000341472 TRAV2A0A0B4J234 112 aa14.88□□□□□ -0.03
SYNE2-201ENST00000341472 IFNA10P01566 189 aa14.88□□□□□ -0.03
SYNE2-201ENST00000341472 CRYBB3P26998 211 aa14.88□□□□□ -0.03
SYNE2-201ENST00000341472 TNFRSF9Q07011 255 aa14.88□□□□□ -0.03
SYNE2-201ENST00000341472 TMEM170AQ8WVE7 144 aa14.88□□□□□ -0.03
SYNE2-201ENST00000341472 CSMD3Q7Z407 3707 aa14.88□□□□□ -0.03
SYNE2-201ENST00000341472 MPTX1A8MV57 137 aa14.87□□□□□ -0.03
SYNE2-201ENST00000341472 H2AFB2P0C5Z0 115 aa14.87□□□□□ -0.03
SYNE2-201ENST00000341472 IGLC1P0CG04 106 aa14.87□□□□□ -0.03
SYNE2-201ENST00000341472 OR10J1P30954 320 aa14.87□□□□□ -0.03
SYNE2-201ENST00000341472 YPEL3P61236 119 aaPredicted RBP14.87□□□□□ -0.03
SYNE2-201ENST00000341472 TMEM128Q5BJH2 165 aa14.87□□□□□ -0.03
SYNE2-201ENST00000341472 CENPSQ8N2Z9 138 aa14.87□□□□□ -0.03
SYNE2-201ENST00000341472 NPIPB3Q92617 1050 aa14.87□□□□□ -0.03
SYNE2-201ENST00000341472 C20orf85Q9H1P6 137 aa14.87□□□□□ -0.03
SYNE2-201ENST00000341472 RBKSQ9H477 322 aa14.87□□□□□ -0.03
SYNE2-201ENST00000341472 HSPB7Q9UBY9 170 aa14.87□□□□□ -0.03
SYNE2-201ENST00000341472 RABAC1Q9UI14 185 aa14.87□□□□□ -0.03
SYNE2-201ENST00000341472 A0A0J9YWU9 116 aa14.86□□□□□ -0.03
SYNE2-201ENST00000341472 DEFB131AP59861 70 aa14.86□□□□□ -0.03
SYNE2-201ENST00000341472 UBE2MP61081 183 aaKnown RBP14.86□□□□□ -0.03
SYNE2-201ENST00000341472 OR1S1Q8NH92 325 aa14.86□□□□□ -0.03
SYNE2-201ENST00000341472 DTD1Q8TEA8 209 aa14.86□□□□□ -0.03
SYNE2-201ENST00000341472 GRAMD2BQ96HH9 432 aa14.86□□□□□ -0.03
SYNE2-201ENST00000341472 NUDT15Q9NV35 164 aa14.86□□□□□ -0.03
SYNE2-201ENST00000341472 DNAH1Q9P2D7 4330 aa14.85□□□□□ -0.03
SYNE2-201ENST00000341472 P2RY1P47900 373 aa14.85□□□□□ -0.03
SYNE2-201ENST00000341472 ATP5IP56385 69 aaPredicted RBP14.85□□□□□ -0.03
SYNE2-201ENST00000341472 OXA1LQ15070 435 aa14.85□□□□□ -0.03
SYNE2-201ENST00000341472 LYG2Q86SG7 212 aa14.85□□□□□ -0.03
SYNE2-201ENST00000341472 ACY3Q96HD9 319 aa14.85□□□□□ -0.03
SYNE2-201ENST00000341472 MARVELD1Q9BSK0 173 aa14.85□□□□□ -0.03
SYNE2-201ENST00000341472 TRAV6A0A075B6T7 132 aa14.84□□□□□ -0.03
SYNE2-201ENST00000341472 JTBO76095 146 aa14.84□□□□□ -0.03
SYNE2-201ENST00000341472 IFNA4P05014 189 aa14.84□□□□□ -0.03
SYNE2-201ENST00000341472 RD3LP0DJH9 198 aa14.84□□□□□ -0.03
SYNE2-201ENST00000341472 VAMP1P23763 118 aa14.84□□□□□ -0.03
SYNE2-201ENST00000341472 FLVCR2Q9UPI3 526 aa14.84□□□□□ -0.03
SYNE2-201ENST00000341472 U3KQE9 123 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms