RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TEX50A0A1B0GTY4 177 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 TMEM14DPA8MWL7 114 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 E9PI62 339 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 HRASP01112 189 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 CD37P11049 281 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 UCP1P25874 307 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 ETV6P41212 452 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 DHODHQ02127 395 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 LINC01556Q5JQF7 62 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 TTC23Q5W5X9 447 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 EBLN2Q6P2I7 272 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 HS3ST5Q8IZT8 346 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 JAGN1Q8N5M9 183 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 OR11H7Q8NGC8 314 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 OR4A4PQ8NGN8 299 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 OR1P1Q8NH06 330 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 CABLES2Q9BTV7 478 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 SDF2L1Q9HCN8 221 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 NDUFA4L2Q9NRX3 87 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 IGHV3-38A0A0C4DH36 116 aa6.91□□□□□ -1.3
ATXN3-201ENST00000340660 ATP6V1E1P36543 226 aa6.91□□□□□ -1.3
ATXN3-201ENST00000340660 MRPL23Q16540 153 aaKnown RBP6.91□□□□□ -1.3
ATXN3-201ENST00000340660 SIGLEC15Q6ZMC9 328 aa6.91□□□□□ -1.3
ATXN3-201ENST00000340660 Q6ZTI0 123 aa6.91□□□□□ -1.3
ATXN3-201ENST00000340660 Q8N976 141 aa6.91□□□□□ -1.3
ATXN3-201ENST00000340660 OR10J5Q8NHC4 309 aa6.91□□□□□ -1.3
ATXN3-201ENST00000340660 GPR148Q8TDV2 347 aa6.91□□□□□ -1.3
ATXN3-201ENST00000340660 LSM10Q969L4 123 aaKnown RBP6.91□□□□□ -1.3
ATXN3-201ENST00000340660 DOK5Q9P104 306 aa6.91□□□□□ -1.3
ATXN3-201ENST00000340660 SOCS3O14543 225 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 FABP7O15540 132 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 TMEM50AO95807 157 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 CD2P06729 351 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 GBX2P52951 348 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-201ENST00000340660 VSNL1P62760 191 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 PRCDQ00LT1 54 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 ZNF415Q09FC8 603 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 EIF4EBP1Q13541 118 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-201ENST00000340660 TBCEQ15813 527 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-201ENST00000340660 SPINK6Q6UWN8 80 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 MS4A15Q8N5U1 240 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 COQ8AQ8NI60 647 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 TCTEX1D2Q8WW35 142 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 DCSTAMPQ9H295 470 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 MRGBPQ9NV56 204 aa6.9□□□□□ -1.3
ATXN3-201ENST00000340660 RBMX2Q9Y388 322 aaKnown RBP6.9□□□□□ -1.3
ATXN3-201ENST00000340660 TRAV8-7A0A075B6U6 113 aa6.89□□□□□ -1.31
ATXN3-201ENST00000340660 A0A0A6YYD4 124 aa6.89□□□□□ -1.31
ATXN3-201ENST00000340660 ALPLP05186 524 aa6.89□□□□□ -1.31
ATXN3-201ENST00000340660 PSMB3P49720 205 aa6.89□□□□□ -1.31
ATXN3-201ENST00000340660 PRR3P79522 188 aaKnown RBP6.89□□□□□ -1.31
ATXN3-201ENST00000340660 OR52E5Q8NH55 327 aa6.89□□□□□ -1.31
ATXN3-201ENST00000340660 PINX1Q96BK5 328 aaKnown RBP6.89□□□□□ -1.31
ATXN3-201ENST00000340660 GPR146Q96CH1 333 aa6.89□□□□□ -1.31
ATXN3-201ENST00000340660 C12orf4Q9NQ89 552 aa6.89□□□□□ -1.31
ATXN3-201ENST00000340660 PLEKHJ1Q9NW61 149 aa6.89□□□□□ -1.31
ATXN3-201ENST00000340660 IMPAD1Q9NX62 359 aa6.89□□□□□ -1.31
ATXN3-201ENST00000340660 TRAV26-2A0A0B4J265 109 aa6.88□□□□□ -1.31
ATXN3-201ENST00000340660 H7C1H1 209 aa6.88□□□□□ -1.31
ATXN3-201ENST00000340660 J3QRE1 110 aa6.88□□□□□ -1.31
ATXN3-201ENST00000340660 PRAF2O60831 178 aa6.88□□□□□ -1.31
ATXN3-201ENST00000340660 PRKACGP22612 351 aa6.88□□□□□ -1.31
ATXN3-201ENST00000340660 NPBWR1P48145 328 aa6.88□□□□□ -1.31
ATXN3-201ENST00000340660 TMEM256Q8N2U0 113 aa6.88□□□□□ -1.31
ATXN3-201ENST00000340660 OR8J1Q8NGP2 316 aa6.88□□□□□ -1.31
ATXN3-201ENST00000340660 OR1L8Q8NGR8 309 aa6.88□□□□□ -1.31
ATXN3-201ENST00000340660 SPATA2Q9UM82 520 aa6.88□□□□□ -1.31
ATXN3-201ENST00000340660 A0A0B4J293 547 aa6.87□□□□□ -1.31
ATXN3-201ENST00000340660 DAPL1A0PJW8 107 aa6.87□□□□□ -1.31
ATXN3-201ENST00000340660 CCSO14618 274 aa6.87□□□□□ -1.31
ATXN3-201ENST00000340660 FGF2P09038 288 aa6.87□□□□□ -1.31
ATXN3-201ENST00000340660 MAGOHP61326 146 aaKnown RBP6.87□□□□□ -1.31
ATXN3-201ENST00000340660 SSX1Q16384 188 aa6.87□□□□□ -1.31
ATXN3-201ENST00000340660 GPR141Q7Z602 305 aa6.87□□□□□ -1.31
ATXN3-201ENST00000340660 H1FOOQ8IZA3 346 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-201ENST00000340660 C16orf45Q96MC5 204 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-201ENST00000340660 TMEM235A6NFC5 223 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 K7EQD1 137 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 BUB3O43684 328 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 IGHV3-30P01768 117 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 IGHV3-33P01772 117 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 NPSP0C0P6 89 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 IGHV3-30-3P0DP02 117 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 IGHV3-30-5P0DP03 117 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 ID1P41134 155 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 CNN1P51911 297 aaKnown RBP6.86□□□□□ -1.31
ATXN3-201ENST00000340660 CRYBA4P53673 196 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 LAGE3Q14657 143 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 POU2AF1Q16633 256 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 C12orf73Q69YU5 71 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 BLNKQ8WV28 456 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 TMEM203Q969S6 136 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 TMEM230Q96A57 120 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 PRRG3Q9BZD7 231 aa6.86□□□□□ -1.31
ATXN3-201ENST00000340660 MRPL36Q9P0J6 103 aaKnown RBP6.86□□□□□ -1.31
ATXN3-201ENST00000340660 TRGV2A0A075B6R0 118 aa6.85□□□□□ -1.31
ATXN3-201ENST00000340660 COX4I1P13073 169 aa6.85□□□□□ -1.31
ATXN3-201ENST00000340660 CD36P16671 472 aa6.85□□□□□ -1.31
ATXN3-201ENST00000340660 DCKP27707 260 aa6.85□□□□□ -1.31
ATXN3-201ENST00000340660 SRIP30626 198 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms