RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 KCNIP1Q9NZI2 227 aa12.52□□□□□ -0.4
LIMK2-203ENST00000340552 IGFL3Q6UXB1 125 aa12.52□□□□□ -0.41
LIMK2-203ENST00000340552 SPCS1Q9Y6A9 102 aa12.52□□□□□ -0.41
LIMK2-203ENST00000340552 CEACAM3P40198 252 aa12.52□□□□□ -0.41
LIMK2-203ENST00000340552 VSTM2AQ8TAG5 236 aa12.52□□□□□ -0.41
LIMK2-203ENST00000340552 LRRC29Q8WV35 223 aa12.52□□□□□ -0.41
LIMK2-203ENST00000340552 NANOS1Q8WY41 292 aaKnown RBP12.52□□□□□ -0.41
LIMK2-203ENST00000340552 MAP1LC3CQ9BXW4 147 aa12.52□□□□□ -0.41
LIMK2-203ENST00000340552 TMEM167BQ9NRX6 74 aa12.52□□□□□ -0.41
LIMK2-203ENST00000340552 MGAQ8IWI9 3026 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 TRAV26-1A0A087WT03 109 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 PSMB11A5LHX3 300 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 A6NDN8 102 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 HIGD1CA8MV81 97 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 GFRA3O60609 400 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 NGFP01138 241 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 VDAC2P45880 294 aaPredicted RBP12.51□□□□□ -0.41
LIMK2-203ENST00000340552 TRAT1Q6PIZ9 186 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 TPRX1Q8N7U7 411 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 OR5A1Q8NGJ0 315 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 CHCHD1Q96BP2 118 aaKnown RBP12.51□□□□□ -0.41
LIMK2-203ENST00000340552 DUSP13Q9UII6 198 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 CACNA1GO43497 2377 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 BOD1L1Q8NFC6 3051 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 TEPPQ6URK8 271 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 IDI2-AS1Q9NZ38 188 aa12.51□□□□□ -0.41
LIMK2-203ENST00000340552 SLC25A10Q9UBX3 287 aaPredicted RBP12.51□□□□□ -0.41
LIMK2-203ENST00000340552 DCHS1Q96JQ0 3298 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.5□□□□□ -0.41
LIMK2-203ENST00000340552 A0A1B0GXF2 115 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 A0A1W2PPM0 123 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 FGF6P10767 208 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 IGFBP2P18065 325 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 MDP1Q86V88 176 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 CNEP1R1Q8N9A8 125 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 FAM216AQ8WUB2 273 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 GRAMD2BQ96HH9 432 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 PLSCR4Q9NRQ2 329 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 RABAC1Q9UI14 185 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 APC2O95996 2303 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 IGHV1-2P23083 117 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 FABP6P51161 128 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 PRR20EP86478 221 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 PRR20CP86479 221 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 PRR20DP86480 221 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 PRR20BP86481 221 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 PRR20AP86496 221 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 GUSBP1Q15486 140 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 FAM162BQ5T6X4 162 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 C9orf106Q8NAJ2 232 aa12.5□□□□□ -0.41
LIMK2-203ENST00000340552 HSD17B10Q99714 261 aaKnown RBP12.5□□□□□ -0.41
LIMK2-203ENST00000340552 INTS1Q8N201 2190 aaKnown RBP12.49□□□□□ -0.41
LIMK2-203ENST00000340552 ZNF138P52744 262 aa12.49□□□□□ -0.41
LIMK2-203ENST00000340552 CRYBA4P53673 196 aa12.49□□□□□ -0.41
LIMK2-203ENST00000340552 FOXC1Q12948 553 aa12.49□□□□□ -0.41
LIMK2-203ENST00000340552 LINC01545Q5VT33 79 aa12.49□□□□□ -0.41
LIMK2-203ENST00000340552 PLEKHA3Q9HB20 300 aa12.49□□□□□ -0.41
LIMK2-203ENST00000340552 TSSC4Q9Y5U2 329 aaPredicted RBP12.49□□□□□ -0.41
LIMK2-203ENST00000340552 ACACAQ13085 2346 aa12.49□□□□□ -0.41
LIMK2-203ENST00000340552 CKS1BP61024 79 aa12.49□□□□□ -0.41
LIMK2-203ENST00000340552 Q6ZS92 163 aa12.49□□□□□ -0.41
LIMK2-203ENST00000340552 C12orf77C9JDV5 145 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 LYZL6O75951 148 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 LIPFP07098 398 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 GNG3P63215 75 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 FAM231DQ6ZW35 169 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 TEX45Q8NA69 505 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 TIMM8BQ9Y5J9 83 aaPredicted RBP12.48□□□□□ -0.41
LIMK2-203ENST00000340552 GAGE12HA6NDE8 117 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 ZNF207O43670 478 aaKnown RBP12.48□□□□□ -0.41
LIMK2-203ENST00000340552 KIR2DL2P43627 348 aaPredicted RBP12.48□□□□□ -0.41
LIMK2-203ENST00000340552 CCDC144NLQ6NUI1 221 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 ZNF788Q6ZQV5 615 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 Q6ZT83 130 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 VKORC1L1Q8N0U8 176 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 STXBP6Q8NFX7 210 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 GALMQ96C23 342 aa12.48□□□□□ -0.41
LIMK2-203ENST00000340552 K7EM74 188 aa12.47□□□□□ -0.41
LIMK2-203ENST00000340552 PRAMEF5Q5TYX0 476 aa12.47□□□□□ -0.41
LIMK2-203ENST00000340552 PRAMEF6Q5VXH4 476 aa12.47□□□□□ -0.41
LIMK2-203ENST00000340552 NABP2Q9BQ15 211 aa12.47□□□□□ -0.41
LIMK2-203ENST00000340552 TRAV3A0A0B4J244 114 aa12.47□□□□□ -0.41
LIMK2-203ENST00000340552 WDR31Q8NA23 367 aa12.47□□□□□ -0.41
LIMK2-203ENST00000340552 Q8TCH9 128 aa12.47□□□□□ -0.41
LIMK2-203ENST00000340552 CEBPDP49716 269 aaPredicted RBP12.47□□□□□ -0.41
LIMK2-203ENST00000340552 FOXF2Q12947 444 aa12.47□□□□□ -0.41
LIMK2-203ENST00000340552 CD300EQ496F6 205 aaPredicted RBP12.47□□□□□ -0.41
LIMK2-203ENST00000340552 RBMXL3Q8N7X1 1067 aaKnown RBP12.47□□□□□ -0.41
LIMK2-203ENST00000340552 OR4A16Q8NH70 328 aa12.47□□□□□ -0.41
LIMK2-203ENST00000340552 TMEM189A5PLL7 270 aa12.46□□□□□ -0.41
LIMK2-203ENST00000340552 NCR2O95944 276 aa12.46□□□□□ -0.41
LIMK2-203ENST00000340552 OR5AL1P0C617 328 aa12.46□□□□□ -0.41
LIMK2-203ENST00000340552 TBC1D28Q2M2D7 210 aa12.46□□□□□ -0.41
LIMK2-203ENST00000340552 ATP5L2Q7Z4Y8 100 aa12.46□□□□□ -0.41
LIMK2-203ENST00000340552 DKK4Q9UBT3 224 aa12.46□□□□□ -0.41
LIMK2-203ENST00000340552 MAP1BP46821 2468 aaKnown RBP12.46□□□□□ -0.42
LIMK2-203ENST00000340552 MC5RP33032 325 aa12.46□□□□□ -0.42
LIMK2-203ENST00000340552 ZNF48Q96MX3 618 aaPredicted RBP12.46□□□□□ -0.42
LIMK2-203ENST00000340552 SCNM1Q9BWG6 230 aa12.46□□□□□ -0.42
LIMK2-203ENST00000340552 PKIBQ9C010 78 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms