RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 IGHV3-35A0A0C4DH35 117 aa10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 RPS10-NUDT3A0A1W2PQS6 291 aa10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 OR11H12B2RN74 326 aa10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 GNG7O60262 68 aa10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 M6PRP20645 277 aa10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 HAGHQ16775 308 aa10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 IZUMO4Q1ZYL8 232 aa10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 LGALSLQ3ZCW2 172 aaPredicted RBP10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 SELENOHQ8IZQ5 122 aaKnown RBP10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 OR52B4Q8NGK2 314 aa10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 PINX1Q96BK5 328 aaKnown RBP10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 MED9Q9NWA0 146 aa10.02□□□□□ -0.81
SIRPB3P-201ENST00000340424 TSPAN4O14817 238 aa10.01□□□□□ -0.81
SIRPB3P-201ENST00000340424 CD7P09564 240 aa10.01□□□□□ -0.81
SIRPB3P-201ENST00000340424 BMI1P35226 326 aa10.01□□□□□ -0.81
SIRPB3P-201ENST00000340424 BSXQ3C1V8 233 aa10.01□□□□□ -0.81
SIRPB3P-201ENST00000340424 TMEM268Q5VZI3 342 aa10.01□□□□□ -0.81
SIRPB3P-201ENST00000340424 LINC00322Q6ZN03 302 aaPredicted RBP10.01□□□□□ -0.81
SIRPB3P-201ENST00000340424 OR10C1Q96KK4 312 aa10.01□□□□□ -0.81
SIRPB3P-201ENST00000340424 GINS3Q9BRX5 216 aa10.01□□□□□ -0.81
SIRPB3P-201ENST00000340424 C20orf24Q9BUV8 137 aa10.01□□□□□ -0.81
SIRPB3P-201ENST00000340424 A0A0G2JRQ6 117 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 HMSDA8MTL9 139 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 SSNA1O43805 119 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 CD5P06127 495 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 RNASE2P10153 161 aaKnown RBP10□□□□□ -0.81
SIRPB3P-201ENST00000340424 RBMS2Q15434 407 aaKnown RBP10□□□□□ -0.81
SIRPB3P-201ENST00000340424 SPINK9Q5DT21 86 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 Q6ZRM9 215 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 CCDC28AQ8IWP9 274 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 LHFPL5Q8TAF8 219 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 SLC25A21Q9BQT8 299 aaPredicted RBP10□□□□□ -0.81
SIRPB3P-201ENST00000340424 SRD5A3Q9H8P0 318 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 MGAT4CQ9UBM8 478 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 CACNG5Q9UF02 275 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 UBQLN2Q9UHD9 624 aa10□□□□□ -0.81
SIRPB3P-201ENST00000340424 A0A0B4J2A0 478 aa9.99□□□□□ -0.81
SIRPB3P-201ENST00000340424 OR4C46A6NHA9 309 aa9.99□□□□□ -0.81
SIRPB3P-201ENST00000340424 YIF1AO95070 293 aa9.99□□□□□ -0.81
SIRPB3P-201ENST00000340424 SCAF4O95104 1147 aaKnown RBP9.99□□□□□ -0.81
SIRPB3P-201ENST00000340424 TMEM187Q14656 261 aa9.99□□□□□ -0.81
SIRPB3P-201ENST00000340424 DEFB125Q8N687 156 aa9.99□□□□□ -0.81
SIRPB3P-201ENST00000340424 OR2T35Q8NGX2 323 aa9.99□□□□□ -0.81
SIRPB3P-201ENST00000340424 MUC7Q8TAX7 377 aa9.99□□□□□ -0.81
SIRPB3P-201ENST00000340424 TMEM230Q96A57 120 aa9.99□□□□□ -0.81
SIRPB3P-201ENST00000340424 FAM110AQ9BQ89 295 aa9.99□□□□□ -0.81
SIRPB3P-201ENST00000340424 SHPKQ9UHJ6 478 aa9.99□□□□□ -0.81
SIRPB3P-201ENST00000340424 TRAV14DV4A0A0A6YYC5 116 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 IGHV7-4-1A0A0J9YVY3 117 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 DUXBA0A1W2PPF3 345 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 MPC2O95563 127 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 AKR1C4P17516 323 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 OPRK1P41145 380 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 TMEM128Q5BJH2 165 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 ZNF600Q6ZNG1 722 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 LGI3Q8N145 548 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 TMEM116Q8NCL8 245 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 OR4X1Q8NH49 305 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 RNASEH2CQ8TDP1 164 aaKnown RBP9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 GPR146Q96CH1 333 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 HIPK2Q9H2X6 1198 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 HEYLQ9NQ87 328 aaPredicted RBP9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 SMPXQ9UHP9 88 aa9.98□□□□□ -0.81
SIRPB3P-201ENST00000340424 TRAV30A0A087WSZ9 112 aa9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 RBMY1BA6NDE4 496 aaKnown RBP9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 RBMY1EA6NEQ0 496 aaKnown RBP9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 CEBPZOSA8MTT3 80 aa9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 CLN5O75503 358 aa9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 RBMY1DP0C7P1 496 aaKnown RBP9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 SLC25A4P12235 298 aa9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 CMC4P56277 68 aaPredicted RBP9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 SUPT4H1P63272 117 aaKnown RBP9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 C2orf83Q53S99 150 aa9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 NMSQ5H8A3 153 aa9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 FLVCR2Q9UPI3 526 aa9.97□□□□□ -0.81
SIRPB3P-201ENST00000340424 CHEK1O14757 476 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 TMEM50AO95807 157 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 IGHV3-48P01763 117 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 ATP5IP56385 69 aaPredicted RBP9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 SMCO1Q147U7 214 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 OPCMLQ14982 345 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 TOR2AQ5JU69 321 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 ETFRF1Q6IPR1 90 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 SLC24A4Q8NFF2 622 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 ZNF414Q96IQ9 312 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 SEC22CQ9BRL7 303 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 RHPN1-AS1Q9BWJ2 59 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 GGTLC1Q9BX51 225 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 WFDC10AQ9H1F0 79 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 TMEM231Q9H6L2 316 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 HSPB7Q9UBY9 170 aa9.96□□□□□ -0.82
SIRPB3P-201ENST00000340424 IGHV3OR16-8A0A075B7F1 116 aa9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 LOC102724200A0A096LPH7 203 aaPredicted RBP9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 A0A1B0GU03 582 aa9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 ZNF207O43670 478 aaKnown RBP9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 LYL1P12980 280 aa9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 UBE2MP61081 183 aaKnown RBP9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 PAFAH1B2P68402 229 aa9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 TNFRSF9Q07011 255 aa9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 TOMM20LQ6UXN7 152 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms