RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 CACNA1DQ01668 2161 aa0.97□□□□□ -2.25
XRCC4-202ENST00000338635 ADGRL1O94910 1474 aa0.97□□□□□ -2.25
XRCC4-202ENST00000338635 HECW1Q76N89 1606 aa0.97□□□□□ -2.25
XRCC4-202ENST00000338635 PLXND1Q9Y4D7 1925 aa0.97□□□□□ -2.25
XRCC4-202ENST00000338635 TRGV10A0A0A0MS01 117 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 BORCS7-ASMTA0A0B4J1R7 106 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 A0A0D9SEW6 157 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 A0A0D9SG52 128 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 A0A0J9YX75 114 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TLCD2A6NGC4 264 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TMEM212A6NML5 194 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 H7C2G1 150 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 M0R378 163 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 SEC16AO15027 2179 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TRGC2P03986 189 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 DBIP07108 87 aaKnown RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 BCL2P10415 239 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 HRES1P13985 223 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 FXYD2P54710 66 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 PLCXD2Q0VAA5 305 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 KISS1Q15726 138 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 CCDC153Q494R4 210 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 DEFB134Q4QY38 66 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 CCDC58Q4VC31 144 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 PYDC2Q56P42 97 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 BRMS1LQ5PSV4 323 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 PRR9Q5T870 116 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 C1orf140Q5VVS0 124 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 SLC35E3Q7Z769 313 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 OR52R1Q8NGF1 315 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 OR4D11Q8NGI4 311 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 OR5A1Q8NGJ0 315 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 OR51T1Q8NGJ9 327 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 MRPS24Q96EL2 167 aaKnown RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 HIST1H2BLQ99880 126 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 ZNF471Q9BX82 626 aaPredicted RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 YIPF3Q9GZM5 350 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TMEM126AQ9H061 195 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 FAM107BQ9H098 131 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 ZNF106Q9H2Y7 1883 aaKnown RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TRPM3Q9HCF6 1732 aaPredicted RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TMEM138Q9NPI0 162 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 RASL12Q9NYN1 266 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 JPT1Q9UK76 154 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 EPDR1Q9UM22 224 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 HHLA3Q9XRX5 114 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 MAST2Q6P0Q8 1798 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TRPM6Q9BX84 2022 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 CACNA1SQ13698 1873 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 IGHV3-64A0A075B6Q5 118 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TRAV7A0A075B6U4 112 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 A0A1B0GX51 115 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 C7orf71A4D174 169 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 MEIS3P1A6NDR6 274 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 G3V3Q6 166 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 J3KT08 172 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 OR2T1O43869 369 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 CST7O76096 145 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 IGKV1-16P04430 117 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 LGALS3P17931 250 aaKnown RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 S100A11P31949 105 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 AKR1C3P42330 323 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 SRP9P49458 86 aaKnown RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 POLR2HP52434 150 aaKnown RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 NDUFA6P56556 154 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 UBE2BP63146 152 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 EIF3IQ13347 325 aaKnown RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 IGFBP7Q16270 282 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 NDUFA5Q16718 116 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 DEFB115Q30KQ5 88 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 KRTAP6-3Q3LI67 103 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 KHDC3LQ587J8 217 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 C22orf39Q6P5X5 142 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 AGTRAPQ6RW13 159 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 SIGLECL1Q8N7X8 197 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 LINC00304Q8N9R0 145 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TMEM229BQ8NBD8 167 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 OR4C16Q8NGL9 310 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 PFN4Q8NHR9 129 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 STAG3L4Q8TBR4 150 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 WFDC5Q8TCV5 224 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 BORCS8Q96FH0 119 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TSC22D3Q99576 134 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 SLC25A21Q9BQT8 299 aaPredicted RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 MRPL32Q9BYC8 188 aaKnown RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 TCEAL2Q9H3H9 227 aaPredicted RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 POPDC3Q9HBV1 291 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 NHP2Q9NX24 153 aaKnown RBP0.96□□□□□ -2.26
XRCC4-202ENST00000338635 PSORS1C2Q9UIG4 136 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 MED31Q9Y3C7 131 aa0.96□□□□□ -2.26
XRCC4-202ENST00000338635 CPDO75976 1380 aa0.95□□□□□ -2.26
XRCC4-202ENST00000338635 ZCCHC11Q5TAX3 1644 aaKnown RBP0.95□□□□□ -2.26
XRCC4-202ENST00000338635 NYNRINQ9P2P1 1898 aaKnown RBP0.95□□□□□ -2.26
XRCC4-202ENST00000338635 BCL9O00512 1426 aa0.95□□□□□ -2.26
XRCC4-202ENST00000338635 HEATR5AQ86XA9 2040 aa0.95□□□□□ -2.26
XRCC4-202ENST00000338635 TOPBP1Q92547 1522 aa0.95□□□□□ -2.26
XRCC4-202ENST00000338635 TRAV36DV7A0A075B6V5 113 aa0.95□□□□□ -2.26
XRCC4-202ENST00000338635 A0A087WX48 190 aa0.95□□□□□ -2.26
XRCC4-202ENST00000338635 IGHV1-18A0A0C4DH31 117 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms