RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZNF134P52741 427 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 Q8TCH9 128 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 C17orf58Q2M2W7 97 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 VN1R17PQ8TDU5 208 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 YTHDF2Q9Y5A9 579 aaKnown RBP5.14□□□□□ -1.59
PRKDC-202ENST00000338368 DMRT1Q9Y5R6 373 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 GCGP01275 180 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 TMEM155Q4W5P6 130 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 SPRNQ5BIV9 151 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 MGST2Q99735 147 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 LTBP2Q14767 1821 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 MMP23AO75900 390 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 MAS1LP35410 378 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 HAPLN4Q86UW8 402 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 PGPEP1LA6NFU8 196 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 CBY3A6NI87 242 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 NPPCP23582 126 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 SPATA31B1PQ5VZV4 182 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 SEM1Q6ZVN7 128 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 IMMP2LQ96T52 175 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 PSG9Q00887 426 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 AGMATQ9BSE5 352 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 IGHV3-23P01764 117 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 TMEM78Q5T7P6 136 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 OCC1Q8TAD7 63 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 NCOR2Q9Y618 2525 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 M0R143 59 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 TPTE2P1Q5T6R2 138 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 WFDC3Q8IUB2 231 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 CHODLQ9H9P2 273 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 CACNA1AO00555 2505 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 BUB1B-PAK6H3BSN5 160 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 CD99P14209 185 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 PRR14LQ5THK1 2151 aa5.14□□□□□ -1.59
PRKDC-202ENST00000338368 GNLYP22749 145 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 LOXP28300 417 aaPredicted RBP5.13□□□□□ -1.59
PRKDC-202ENST00000338368 ANKHD1Q8IWZ3 2542 aaKnown RBP5.13□□□□□ -1.59
PRKDC-202ENST00000338368 OR5AL1P0C617 328 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 FAM168AQ92567 244 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 NHLH1Q02575 133 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 C7orf69Q9H7B7 122 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 MALRD1Q5VYJ5 2156 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 J3KRW8 73 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 FAM90A2PQ658T7 463 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 RNF5Q99942 180 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 IGHV3OR16-8A0A075B7F1 116 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 A0A0G2JLM5 398 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 C16orf92Q96LL3 132 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 NAGKQ9UJ70 344 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 EPDR1Q9UM22 224 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 TMEM189A5PLL7 270 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 EEF1AKMT3Q96AZ1 226 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 TBX15Q96SF7 602 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 DERL1Q9BUN8 251 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 A0A087X0M5 115 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 A0A1B0GX30 115 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 VDAC2P45880 294 aaPredicted RBP5.13□□□□□ -1.59
PRKDC-202ENST00000338368 CRIP3Q6Q6R5 217 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 DTX2Q86UW9 622 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 MYO9AB2RTY4 2548 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 TNRC6BQ9UPQ9 1833 aaKnown RBP5.13□□□□□ -1.59
PRKDC-202ENST00000338368 TRBV24-1A0A075B6N3 115 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 CXCL1P09341 107 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 CBLN1P23435 193 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 SRIP30626 198 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 GPR183P32249 361 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 IGHV3OR16-13A0A075B7E8 117 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 IGHV3-74A0A0B4J1X5 117 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 CGB1A6NKQ9 187 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 CX3CL1P78423 397 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 TEX38Q6PEX7 206 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 OR5AN1Q8NGI8 311 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 GPR82Q96P67 336 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 SLX1AQ9BQ83 275 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 HSPB9Q9BQS6 159 aa5.13□□□□□ -1.59
PRKDC-202ENST00000338368 MSMPQ1L6U9 139 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 TEX36Q5VZQ5 186 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 ARPC1AQ92747 370 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 FOLR2P14207 255 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 ATP5G2Q06055 141 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 KLRD1Q13241 179 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 TMEM208Q9BTX3 173 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 ABCA2Q9BZC7 2435 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 RNASE2P10153 161 aaKnown RBP5.12□□□□□ -1.59
PRKDC-202ENST00000338368 PSG1P11464 419 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 A1L4Q6 167 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 PPP1R17O96001 155 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 LEMD1Q68G75 181 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 RNASE7Q9H1E1 156 aaKnown RBP5.12□□□□□ -1.59
PRKDC-202ENST00000338368 K7ERU9 68 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HAX1O00165 279 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 AREGP15514 252 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 LINC01551Q86U37 167 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 RNF125Q96EQ8 232 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 OSTCQ9NRP0 149 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 SIGLEC9Q9Y336 463 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 GRIFINA4D1Z8 144 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 PEX7O00628 323 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 KLF17Q5JT82 389 aaPredicted RBP5.12□□□□□ -1.59
PRKDC-202ENST00000338368 PVRIGQ6DKI7 326 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms