RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 A0A1W2PPV4 95 aa11.49□□□□□ -0.57
CBX3-201ENST00000337620 CLN5O75503 358 aa11.49□□□□□ -0.57
CBX3-201ENST00000337620 NPBWR1P48145 328 aa11.49□□□□□ -0.57
CBX3-201ENST00000337620 FGF8P55075 233 aaPredicted RBP11.49□□□□□ -0.57
CBX3-201ENST00000337620 MFAP4P55083 255 aa11.49□□□□□ -0.57
CBX3-201ENST00000337620 TMEM95Q3KNT9 176 aa11.49□□□□□ -0.57
CBX3-201ENST00000337620 TRGV9Q99603 122 aa11.49□□□□□ -0.57
CBX3-201ENST00000337620 C21orf62Q9NYP8 219 aa11.49□□□□□ -0.57
CBX3-201ENST00000337620 TRBV9A0A0B4J1U6 114 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 IGLC1P0CG04 106 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 CDC34P49427 236 aaPredicted RBP11.48□□□□□ -0.57
CBX3-201ENST00000337620 SELENOTP62341 195 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 CCL20P78556 96 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 C15orf32Q32M92 178 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 Q56UQ5 140 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 SPSB3Q6PJ21 355 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 IL34Q6ZMJ4 242 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 RAB24Q969Q5 203 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 PRSS22Q9GZN4 317 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 NPFFR1Q9GZQ6 430 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 TMEM160Q9NX00 188 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 CTXND1A0A1B0GTU2 59 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 MAP1LC3B2A6NCE7 125 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 GNG7O60262 68 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 CD99P14209 185 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 S100A1P23297 94 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 TIGITQ495A1 244 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 NECAP1Q8NC96 275 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 MBD3L1Q8WWY6 194 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 MAP1LC3BQ9GZQ8 125 aa11.48□□□□□ -0.57
CBX3-201ENST00000337620 NUDT19A8MXV4 375 aa11.47□□□□□ -0.57
CBX3-201ENST00000337620 HBE1P02100 147 aa11.47□□□□□ -0.57
CBX3-201ENST00000337620 PPIFP30405 207 aaKnown RBP11.47□□□□□ -0.57
CBX3-201ENST00000337620 SCGB2A2Q13296 93 aa11.47□□□□□ -0.57
CBX3-201ENST00000337620 KLK9Q2XQG4 91 aa11.47□□□□□ -0.57
CBX3-201ENST00000337620 Q71RC1 249 aaPredicted RBP11.47□□□□□ -0.57
CBX3-201ENST00000337620 TMEM86BQ8N661 226 aa11.47□□□□□ -0.57
CBX3-201ENST00000337620 DOK5Q9P104 306 aa11.47□□□□□ -0.57
CBX3-201ENST00000337620 KLK9Q9UKQ9 250 aa11.47□□□□□ -0.57
CBX3-201ENST00000337620 RAB19A4D1S5 217 aa11.47□□□□□ -0.57
CBX3-201ENST00000337620 TRGV3P03979 118 aa11.47□□□□□ -0.57
CBX3-201ENST00000337620 SRD5A1P18405 259 aa11.47□□□□□ -0.57
CBX3-201ENST00000337620 VN1R17PQ8TDU5 208 aa11.47□□□□□ -0.57
CBX3-201ENST00000337620 SEPSECSQ9HD40 501 aaKnown RBP11.47□□□□□ -0.57
CBX3-201ENST00000337620 OR2T8A6NH00 312 aa11.46□□□□□ -0.57
CBX3-201ENST00000337620 DNAJC9-AS1A6NH13 148 aa11.46□□□□□ -0.57
CBX3-201ENST00000337620 SEC14L6B5MCN3 397 aa11.46□□□□□ -0.57
CBX3-201ENST00000337620 IGKV1-17P01599 117 aa11.46□□□□□ -0.57
CBX3-201ENST00000337620 RHOBP62745 196 aa11.46□□□□□ -0.57
CBX3-201ENST00000337620 FAM78BQ5VT40 261 aa11.46□□□□□ -0.57
CBX3-201ENST00000337620 HIVEP2P31629 2446 aa11.46□□□□□ -0.58
CBX3-201ENST00000337620 BAHCC1Q9P281 2608 aa11.46□□□□□ -0.58
CBX3-201ENST00000337620 TRAV30A0A087WSZ9 112 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 TRAV1-1A0A0B4J248 108 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 F8W735 103 aaPredicted RBP11.45□□□□□ -0.58
CBX3-201ENST00000337620 PF4V1P10720 104 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 PSG1P11464 419 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 ORM2P19652 201 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 TPPP2P59282 170 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 SRSF3P84103 164 aaKnown RBP11.45□□□□□ -0.58
CBX3-201ENST00000337620 ATP5G2Q06055 141 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 SPATA31B1PQ5VZV4 182 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 ZNF329Q86UD4 541 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 IQCF2Q8IXL9 164 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 TMEM37Q8WXS4 190 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 TMEM231Q9H6L2 316 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 ZNF702PQ9H963 129 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 DNAJC4Q9NNZ3 241 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 CDC42EP3Q9UKI2 254 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 CUBNO60494 3623 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 I3L521 148 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 COX7A2P2O60397 106 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 OR5G3P0C626 314 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 RD3LP0DJH9 198 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 EIF4E3Q8N5X7 224 aaKnown RBP11.45□□□□□ -0.58
CBX3-201ENST00000337620 COMMD1Q8N668 190 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 OR1B1Q8NGR6 318 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 ZNF502Q8TBZ5 544 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 EIF5A2Q9GZV4 153 aaKnown RBP11.45□□□□□ -0.58
CBX3-201ENST00000337620 ESM1Q9NQ30 184 aa11.45□□□□□ -0.58
CBX3-201ENST00000337620 MTORP42345 2549 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 FABP1P07148 127 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 OR1L4Q8NGR5 311 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 EEF1AKMT3Q96AZ1 226 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 TXN2Q99757 166 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 C19orf24Q9BVV8 132 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 TMPRSS5Q9H3S3 457 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 FAM181BA6NEQ2 426 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 FAM223BA6NKX1 122 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 CLEC3BP05452 202 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 GPR183P32249 361 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 GUK1Q16774 197 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 TOR2AQ5JU69 321 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 C10orf113Q5VZT2 155 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 MIR17HGQ75NE6 70 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 FAM223AQ8IWN6 122 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 GATAD1Q8WUU5 269 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 NARS2Q96I59 477 aaKnown RBP11.44□□□□□ -0.58
CBX3-201ENST00000337620 PFDN5Q99471 154 aa11.44□□□□□ -0.58
CBX3-201ENST00000337620 KLK15Q9H2R5 256 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms