RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 DOCK9Q9BZ29 2069 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 IL18BPO95998 194 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 ADCYAP1P18509 176 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 FOXL1Q12952 345 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 NEUROG1Q92886 237 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 FOXC2Q99958 501 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 RNF125Q96EQ8 232 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 LINC00614P0C842 121 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 E9PQ18 207 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 NBR2O15453 112 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 PDLIM4P50479 330 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 TMEM105Q8N8V8 129 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 AGMATQ9BSE5 352 aa11.39□□□□□ -0.59
RTN4-202ENST00000337526 PTPRDP23468 1912 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 TRAV9-2A0A087WT02 112 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 FABP5P3A8MUU1 101 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 LYL1P12980 280 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 PYY3Q5JQD4 70 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 NEU4Q8WWR8 484 aaPredicted RBP11.38□□□□□ -0.59
RTN4-202ENST00000337526 DERL1Q9BUN8 251 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 GEMIN7Q9H840 131 aaKnown RBP11.38□□□□□ -0.59
RTN4-202ENST00000337526 SEPSECSQ9HD40 501 aaKnown RBP11.38□□□□□ -0.59
RTN4-202ENST00000337526 CLDN16Q9Y5I7 305 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 CEACAM4O75871 244 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 CD24P25063 80 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 CIRBPQ14011 172 aaKnown RBP11.38□□□□□ -0.59
RTN4-202ENST00000337526 RRN3P1Q2M238 152 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 PSMG4Q5JS54 123 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 C10orf55Q5SWW7 151 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 RAX2Q96IS3 184 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 SCGB3A1Q96QR1 104 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 THADAQ6YHU6 1953 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 DOCK11Q5JSL3 2073 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 TRAV5A0A0B4J249 113 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 ASIPP42127 132 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 KLRB1Q12918 225 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 CLEC19AQ6UXS0 136 aa11.38□□□□□ -0.59
RTN4-202ENST00000337526 IGHV1-46P01743 117 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 LILRA1O75019 489 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 PPP1R17O96001 155 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 ZNF257Q9Y2Q1 563 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 CFPP27918 469 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 Q6ZRM9 215 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 PSG8Q9UQ74 426 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 EP400Q96L91 3159 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 SPATA31B1PQ5VZV4 182 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 PVRIGQ6DKI7 326 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 TSKUQ8WUA8 353 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 BDP1A6H8Y1 2624 aa11.37□□□□□ -0.59
RTN4-202ENST00000337526 TRBV6-6A0A0A6YYG2 114 aa11.36□□□□□ -0.59
RTN4-202ENST00000337526 A0A0G2JRQ6 117 aa11.36□□□□□ -0.59
RTN4-202ENST00000337526 OR10J3Q5JRS4 329 aa11.36□□□□□ -0.59
RTN4-202ENST00000337526 BEX4Q9NWD9 120 aaPredicted RBP11.36□□□□□ -0.59
RTN4-202ENST00000337526 LYNX1G3V0Z9 82 aa11.36□□□□□ -0.59
RTN4-202ENST00000337526 UBE2L6O14933 153 aa11.36□□□□□ -0.59
RTN4-202ENST00000337526 LYNX1P0DP58 116 aa11.36□□□□□ -0.59
RTN4-202ENST00000337526 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.36□□□□□ -0.59
RTN4-202ENST00000337526 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
RTN4-202ENST00000337526 C9JQL5 133 aa11.36□□□□□ -0.59
RTN4-202ENST00000337526 Q0VFX4 171 aa11.36□□□□□ -0.59
RTN4-202ENST00000337526 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
RTN4-202ENST00000337526 Q6ZS49 121 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 CENPVQ7Z7K6 275 aaPredicted RBP11.35□□□□□ -0.59
RTN4-202ENST00000337526 A0A0G2JLM5 398 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.35□□□□□ -0.59
RTN4-202ENST00000337526 TMEM256Q8N2U0 113 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 RNASE6Q93091 150 aaKnown RBP11.35□□□□□ -0.59
RTN4-202ENST00000337526 TRAV3A0A0B4J244 114 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 COX6B1P14854 86 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 MST1LQ2TV78 715 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 NUDT10Q8NFP7 164 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 NUDT11Q96G61 164 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 MGST2Q99735 147 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 PLSCR4Q9NRQ2 329 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 SPCS1Q9Y6A9 102 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 LINC00473A8K010 186 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 E9PLN8 166 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 GFRA3O60609 400 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 MEIG1Q5JSS6 88 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 ASCL4Q6XD76 172 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 CD177Q8N6Q3 437 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 ASCL2Q99929 193 aa11.35□□□□□ -0.59
RTN4-202ENST00000337526 Q6P435 159 aa11.34□□□□□ -0.59
RTN4-202ENST00000337526 DUX5Q96PT3 197 aa11.34□□□□□ -0.59
RTN4-202ENST00000337526 LINC00205P59089 165 aa11.34□□□□□ -0.59
RTN4-202ENST00000337526 C19orf67A6NJJ6 358 aa11.34□□□□□ -0.59
RTN4-202ENST00000337526 TNFSF13O75888 250 aa11.34□□□□□ -0.59
RTN4-202ENST00000337526 TMEM50AO95807 157 aa11.34□□□□□ -0.59
RTN4-202ENST00000337526 B3GALT5-AS1P59052 145 aa11.34□□□□□ -0.59
RTN4-202ENST00000337526 C20orf204Q6ZNR8 217 aa11.34□□□□□ -0.59
RTN4-202ENST00000337526 FOXL2NBQ6ZUU3 175 aa11.34□□□□□ -0.59
RTN4-202ENST00000337526 A0A1B0GWB2 263 aa11.33□□□□□ -0.59
RTN4-202ENST00000337526 TIMM23O14925 209 aa11.33□□□□□ -0.59
RTN4-202ENST00000337526 HBDP02042 147 aa11.33□□□□□ -0.59
RTN4-202ENST00000337526 CD59P13987 128 aa11.33□□□□□ -0.59
RTN4-202ENST00000337526 NTF4P34130 210 aa11.33□□□□□ -0.59
RTN4-202ENST00000337526 C8orf46Q8TAG6 207 aa11.33□□□□□ -0.59
RTN4-202ENST00000337526 H3BUT2 72 aa11.33□□□□□ -0.6
RTN4-202ENST00000337526 LEPP41159 167 aa11.33□□□□□ -0.6
RTN4-202ENST00000337526 IGHV3-11P01762 117 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms