RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 AASSQ9UDR5 926 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 MLXQ9UH92 298 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 MRPS7Q9Y2R9 242 aaKnown RBP0.97□□□□□ -2.25
LINC00643-201ENST00000334389 STARD10Q9Y365 291 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 LINC00588Q9Y4M8 146 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 U3KQ87 197 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 CSMD2Q7Z408 3487 aa0.97□□□□□ -2.25
LINC00643-201ENST00000334389 IGLV5-37A0A075B6J1 123 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 DEFB131BA0A096LNP1 70 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TRAV8-3A0A0A6YYJ7 113 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM30CPA0ZSE6 113 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 OR11H12B2RN74 326 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 H0Y9J4 135 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 SH2D1BO14796 132 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 WBP4O75554 376 aaKnown RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 EIF3GO75821 320 aaKnown RBP eCLIP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 ARL6IP5O75915 188 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 ATG12O94817 140 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 SCGB1D1O95968 90 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 CH25HO95992 272 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 LALBAP00709 142 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 GASTP01350 101 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TYMSP04818 313 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 OR5AC1P0C628 307 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 ADORA3P0DMS8 318 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 PTHLHP12272 177 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 HIST1H1CP16403 213 aaKnown RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 S100A11P31949 105 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 SSTR5P35346 364 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 SOAT1P35610 550 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 AQP2P41181 271 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 REG1BP48304 166 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 CX3CR1P49238 355 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 CLDN12P56749 244 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 RBM11P57052 281 aaKnown RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TAS2R30P59541 319 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 OR2B8PP59922 312 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 RPS27AP62979 156 aaKnown RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 HES1Q14469 280 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TSTQ16762 297 aaKnown RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 BCL2L15Q5TBC7 163 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 KRT80Q6KB66 452 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TNFAIP8L2Q6P589 184 aaPredicted RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM88Q6PEY1 159 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 LINC01551Q86U37 167 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 LRRC18Q8N456 261 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 ARRDC1Q8N5I2 433 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 GATD1Q8NB37 220 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 NHLRC2Q8NBF2 726 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 OR8B12Q8NGG6 310 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 OR52N4Q8NGI2 321 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 OR52B4Q8NGK2 314 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 OR10G7Q8NGN6 311 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 OR4K13Q8NH42 304 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 OR52J3Q8NH60 311 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 ATP6V0E2Q8NHE4 81 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 AKR7LQ8NHP1 331 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 ORAOV1Q8WV07 137 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 CCDC124Q96CT7 223 aaKnown RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 JSRP1Q96MG2 331 aaPredicted RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 DERL3Q96Q80 235 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TBX5Q99593 518 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 ZNF2Q9BSG1 426 aaPredicted RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 FGF23Q9GZV9 251 aaPredicted RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM185BQ9H7F4 350 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 BIN3Q9NQY0 253 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 COPZ2Q9P299 210 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TP73-AS1Q9UF72 201 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 RAB22AQ9UL26 194 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TPRKBQ9Y3C4 175 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 RBM7Q9Y580 266 aaKnown RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 VPS13AQ96RL7 3174 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 A0A087X002 238 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 IGHV4-28A0A0C4DH34 117 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 ANXA2P2A6NMY6 339 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 COLCA2A8K830 154 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 SNRPGP15A8MWD9 76 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 G3V2T6 193 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 SAP18O00422 153 aaKnown RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 MFNGO00587 321 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 CIB2O75838 187 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 OR2C1O95371 312 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 CPSF4O95639 269 aaKnown RBP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 NPSP0C0P6 89 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 GKN3PP0CG01 181 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 LIMS3P0CW19 117 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 LIMS4P0CW20 117 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 SMIM17P0DL12 118 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 MYL12AP19105 171 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 RBP2P50120 134 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 CCR6P51684 374 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 TAS2R31P59538 309 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 EWSR1Q01844 656 aaKnown RBP eCLIP0.96□□□□□ -2.26
LINC00643-201ENST00000334389 UNC119Q13432 240 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 C6orf99Q4VX62 202 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 SLC25A24Q6NUK1 477 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 CNIH2Q6PI25 160 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 GLIPR1L1Q6UWM5 242 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 BTNL8Q6UX41 500 aa0.96□□□□□ -2.26
LINC00643-201ENST00000334389 MRPL21Q7Z2W9 205 aaKnown RBP0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms