RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 TSPAN9O75954 239 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 CNIH1O95406 144 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 IGHV3-48P01763 117 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 APELAP0DMC3 54 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 NPPCP23582 126 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 PDLIM4P50479 330 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 RND2P52198 227 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 MFAP2P55001 183 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 LGALS4P56470 323 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 SELENOTP62341 195 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 RPL23P62829 140 aaKnown RBP6.94□□□□□ -1.3
LSAMP-201ENST00000333617 SSBP2P81877 361 aaPredicted RBP6.94□□□□□ -1.3
LSAMP-201ENST00000333617 KIAA0141Q14154 515 aaPredicted RBP6.94□□□□□ -1.3
LSAMP-201ENST00000333617 HES1Q14469 280 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 ELOBQ15370 118 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 SSX2Q16385 188 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 MINOS1Q5TGZ0 78 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 ZNF343Q6P1L6 599 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 PQLC2Q6ZP29 291 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 ZFP82Q8N141 532 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 NPBQ8NG41 125 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 OR2T10Q8NGZ9 312 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 MALSU1Q96EH3 234 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 RNF2Q99496 336 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 SRSF8Q9BRL6 282 aaKnown RBP6.94□□□□□ -1.3
LSAMP-201ENST00000333617 MRPL32Q9BYC8 188 aaKnown RBP6.94□□□□□ -1.3
LSAMP-201ENST00000333617 BPESC1Q9GZL8 116 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 SIRPDQ9H106 197 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 TMEM167BQ9NRX6 74 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 F11RQ9Y624 299 aaKnown RBP6.94□□□□□ -1.3
LSAMP-201ENST00000333617 MINOS1-NBL1R4GNA1 71 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 ARL2-SNX15V9GYD0 113 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 CELSR1Q9NYQ6 3014 aa6.94□□□□□ -1.3
LSAMP-201ENST00000333617 SVEP1Q4LDE5 3571 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 CSMD1Q96PZ7 3565 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 ZFHX3Q15911 3703 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 IGKV1D-37A0A075B6S9 117 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 FCN1O00602 326 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 COX7A2P2O60397 106 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 OR7C2O60412 319 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 NDUFA3O95167 84 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 NDUFB4O95168 129 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 CRYGCP07315 174 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 BPIFB3P59826 476 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 LMO4P61968 165 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 PAX2Q02962 417 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 OR51G1Q8NGK1 321 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 OR1L4Q8NGR5 311 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 C2CD4CQ8TF44 421 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 Q8WTZ3 238 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 TMEM37Q8WXS4 190 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 EAF1Q96JC9 268 aaPredicted RBP6.93□□□□□ -1.3
LSAMP-201ENST00000333617 UHRF2Q96PU4 802 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 PFDN5Q99471 154 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 SLC25A33Q9BSK2 321 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 DNAJC4Q9NNZ3 241 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 BIN3Q9NQY0 253 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 MRPL36Q9P0J6 103 aaKnown RBP6.93□□□□□ -1.3
LSAMP-201ENST00000333617 YTHDF2Q9Y5A9 579 aaKnown RBP6.93□□□□□ -1.3
LSAMP-201ENST00000333617 URGCP-MRPS24S4R325 110 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 CHD6Q8TD26 2715 aa6.93□□□□□ -1.3
LSAMP-201ENST00000333617 PSMB11A5LHX3 300 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 TOX4O94842 621 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 IGHV4-39P01824 125 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 C8orf88P0DMB2 117 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 CTRB1P17538 263 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 CD24P25063 80 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 ZNF90Q03938 601 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 C5orf64Q2M2E5 130 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 SMUG1Q53HV7 270 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 C10orf113Q5VZT2 155 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 CTRB2Q6GPI1 263 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 C19orf35Q6ZS72 473 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 C1QL4Q86Z23 238 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 TMEM116Q8NCL8 245 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 OR4X1Q8NH49 305 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 IGFBPL1Q8WX77 278 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 TRGV9Q99603 122 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 CCL19Q99731 98 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 SAV1Q9H4B6 383 aaPredicted RBP6.92□□□□□ -1.3
LSAMP-201ENST00000333617 TNFRSF19Q9NS68 423 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 DOK5Q9P104 306 aa6.92□□□□□ -1.3
LSAMP-201ENST00000333617 TBL2Q9Y4P3 447 aaKnown RBP6.92□□□□□ -1.3
LSAMP-201ENST00000333617 TGIF2-C20orf24A0A0A6YYL0 155 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 H7BYZ3 331 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 CXCL1P09341 107 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 RPS10P46783 165 aaKnown RBP6.91□□□□□ -1.3
LSAMP-201ENST00000333617 UBE2E1P51965 193 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 C16orf82Q7Z2V1 217 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 ZNF503Q96F45 646 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 TBX15Q96SF7 602 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 DERL1Q9BUN8 251 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 IGHV3-21A0A0B4J1V1 117 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 S100A6P06703 90 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 MED14OSP0DP75 135 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 EBI3Q14213 229 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 FXYD3Q14802 87 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 RUSC1-AS1Q66K80 236 aa6.91□□□□□ -1.3
LSAMP-201ENST00000333617 LINC01551Q86U37 167 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms