RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 PAXXQ9BUH6 204 aa11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 CHODLQ9H9P2 273 aa11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 WNK2Q9Y3S1 2297 aa11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 TEX22C9J3V5 150 aa11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 AMBPP02760 352 aa11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 CRYGCP07315 174 aa11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 ORM2P19652 201 aa11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 COA6Q5JTJ3 125 aaKnown RBP11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 LINC00305Q7Z4B0 112 aa11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 CBLN4Q9NTU7 201 aa11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 IL36BQ9NZH7 164 aa11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 AKAP6Q13023 2319 aa11.88□□□□□ -0.51
CLCNKA-201ENST00000331433 ITPR1Q14643 2758 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 LY6LH3BQJ8 138 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 TIMM23O14925 209 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 SELENOTP62341 195 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 LY6G5BQ8NDX9 201 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 LINC00479Q96M42 142 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 RNASE7Q9H1E1 156 aaKnown RBP11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 GSX1Q9H4S2 264 aaPredicted RBP11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 AMMECR1Q9Y4X0 333 aaPredicted RBP11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 DMRT1Q9Y5R6 373 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 LY6DQ14210 128 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 PLGLAQ15195 96 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 PVRIGQ6DKI7 326 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 ETFRF1Q6IPR1 90 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 MRPL41Q8IXM3 137 aaKnown RBP11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 OR1B1Q8NGR6 318 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 V9GYV3 84 aa11.87□□□□□ -0.51
CLCNKA-201ENST00000331433 CNN1P51911 297 aaKnown RBP11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 KLRD1Q13241 179 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 TIGITQ495A1 244 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 C11orf71Q6IPW1 123 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 NHLRC2Q8NBF2 726 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 SRSF12Q8WXF0 261 aaKnown RBP11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 TIMD4Q96H15 378 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 BTF3L4Q96K17 158 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 HILPDAQ9Y5L2 63 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 A0A1B0GUS0 222 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 FRMD6-AS1P0C7T7 363 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 CBLN1P23435 193 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 CD24P25063 80 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 PDLIM4P50479 330 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 FXYD3Q14802 87 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 ASPHD1Q5U4P2 390 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 FXYD5Q96DB9 178 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 IGF2BP2-AS1Q96M15 143 aa11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 F11RQ9Y624 299 aaKnown RBP11.86□□□□□ -0.51
CLCNKA-201ENST00000331433 A0A1W2PRD5 423 aa11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 A0A1W2PRF3 423 aa11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 A0A1W2PRM7 423 aa11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 IGLV2-8P01709 118 aa11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 TMEM116Q8NCL8 245 aa11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 C22orf15Q8WYQ4 148 aa11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 MGST1P10620 155 aaKnown RBP11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 ADMP35318 185 aa11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 CTAG1AP78358 180 aa11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 MMDQ15546 238 aa11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 RPEL1Q2QD12 228 aa11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 TPTE2P1Q5T6R2 138 aa11.85□□□□□ -0.51
CLCNKA-201ENST00000331433 A0A1W2PPR1 153 aa11.84□□□□□ -0.51
CLCNKA-201ENST00000331433 HTR1DP28221 377 aa11.84□□□□□ -0.51
CLCNKA-201ENST00000331433 ZNF329Q86UD4 541 aa11.84□□□□□ -0.51
CLCNKA-201ENST00000331433 TRGV9Q99603 122 aa11.84□□□□□ -0.51
CLCNKA-201ENST00000331433 GCGP01275 180 aa11.84□□□□□ -0.51
CLCNKA-201ENST00000331433 OR8I2Q8N0Y5 310 aa11.84□□□□□ -0.51
CLCNKA-201ENST00000331433 BLNKQ8WV28 456 aa11.84□□□□□ -0.51
CLCNKA-201ENST00000331433 SSBP3Q9BWW4 388 aaPredicted RBP11.84□□□□□ -0.51
CLCNKA-201ENST00000331433 LOC105371242A0A075B767 164 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 TRAV34A0A0B4J273 112 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 SPINK4O60575 86 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 HIST1H1BP16401 226 aaKnown RBP11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 YPEL3P61236 119 aaPredicted RBP11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 RANP62826 216 aaKnown RBP11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 FBLN7Q53RD9 439 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 LEMD1Q68G75 181 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 PERPQ96FX8 193 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 PRDM13Q9H4Q3 707 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 DPM3Q9P2X0 92 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 CNIH1O95406 144 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 TCL1AP56279 114 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 GNG5P63218 68 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 OR11H6Q8NGC7 330 aa11.83□□□□□ -0.52
CLCNKA-201ENST00000331433 GRIFINA4D1Z8 144 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 CORTO00230 105 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 CDKN1AP38936 164 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 IER3P46695 156 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 SLC35B1P78383 322 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 TMEM256Q8N2U0 113 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 OR1L6Q8NGR2 347 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 NEU4Q8WWR8 484 aaPredicted RBP11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 OSTCQ9NRP0 149 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 CDC42EP3Q9UKI2 254 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 PEX7O00628 323 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 NDUFS7O75251 213 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 HYPMO75409 117 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 IBA57Q5T440 356 aaKnown RBP11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 CFHR4Q92496 578 aa11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 FAM103A1Q9BTL3 118 aaKnown RBP11.82□□□□□ -0.52
CLCNKA-201ENST00000331433 WNT10AQ9GZT5 417 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms