RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 HSPE1P61604 102 aaKnown RBP12.82□□□□□ -0.36
PDGFB-201ENST00000331163 RPL23P62829 140 aaKnown RBP12.82□□□□□ -0.36
PDGFB-201ENST00000331163 TDRG1Q3Y452 100 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 WFDC11Q8NEX6 87 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 TMEM208Q9BTX3 173 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 PAX9P55771 341 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 MEF2BQ02080 365 aaPredicted RBP12.81□□□□□ -0.36
PDGFB-201ENST00000331163 FAM120AOSQ5T036 256 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 ZNF841Q6ZN19 808 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 VN1R17PQ8TDU5 208 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 IGHV3-49A0A0A0MS15 119 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 HAX1O00165 279 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 GCGP01275 180 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 FFAR4Q5NUL3 377 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 IMMP2LQ96T52 175 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 YAE1D1Q9NRH1 226 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 NAGKQ9UJ70 344 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 TENM4Q6N022 2769 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 CNN1P51911 297 aaKnown RBP12.81□□□□□ -0.36
PDGFB-201ENST00000331163 HIST2H2BDQ6DRA6 164 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 DPPA3Q6W0C5 159 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 FAM216AQ8WUB2 273 aa12.81□□□□□ -0.36
PDGFB-201ENST00000331163 CIB3Q96Q77 187 aaPredicted RBP12.81□□□□□ -0.36
PDGFB-201ENST00000331163 PIGBOS1A0A0B4J2F0 54 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 H3BUX3 64 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 MOSP00540 346 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 MC5RP33032 325 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 RND2P52198 227 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 ID3Q02535 119 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 RAB31Q13636 194 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 SLC35E1Q96K37 410 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 SAMD10Q9BYL1 202 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 PRNDQ9UKY0 176 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 NUPR1O60356 82 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 MSMBP08118 114 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 AREGP15514 252 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 BRWD1-AS2P59051 145 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 Q8N7P7 452 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 ACTR3CQ9C0K3 210 aaPredicted RBP12.8□□□□□ -0.36
PDGFB-201ENST00000331163 BAHCC1Q9P281 2608 aa12.8□□□□□ -0.36
PDGFB-201ENST00000331163 KIR2DS2P43631 304 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 ERVFC1-1P60608 527 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 GCSAMLQ5JQS6 135 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 MIC13Q5XKP0 118 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 LCNL1Q6ZST4 164 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 OR2T6Q8NHC8 308 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 VSTM2AQ8TAG5 236 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 SPOCK3Q9BQ16 436 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 KAAG1Q9UBP8 84 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 POLR3KQ9Y2Y1 108 aaPredicted RBP12.79□□□□□ -0.36
PDGFB-201ENST00000331163 NF1P21359 2839 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 OR7C2O60412 319 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 RPLP1P05386 114 aaKnown RBP12.79□□□□□ -0.36
PDGFB-201ENST00000331163 PFN1P07737 140 aaKnown RBP12.79□□□□□ -0.36
PDGFB-201ENST00000331163 RPL11P62913 178 aaKnown RBP12.79□□□□□ -0.36
PDGFB-201ENST00000331163 ZNF329Q86UD4 541 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 OR4P4Q8NGL7 312 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 FAM106CPP0CH98 169 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 PRTN3P24158 256 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 SRSF7Q16629 238 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDGFB-201ENST00000331163 Q56UQ5 140 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 ZNF295-AS1Q8N0V1 137 aa12.79□□□□□ -0.36
PDGFB-201ENST00000331163 UNQ5815/PRO19632Q6UWF5 114 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 PPP1R27Q86WC6 154 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 NPIPB3Q92617 1050 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 CTDSP1Q9GZU7 261 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 CBY1Q9Y3M2 126 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 A0A1B0GWJ7 208 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 KRTDAPP60985 99 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 LMO4P61968 165 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 RPP25LQ8N5L8 163 aaKnown RBP12.78□□□□□ -0.36
PDGFB-201ENST00000331163 LSM10Q969L4 123 aaKnown RBP12.78□□□□□ -0.36
PDGFB-201ENST00000331163 B4DSR2 109 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 IGHV3-11P01762 117 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 TPTE2P1Q5T6R2 138 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 KCNIP4Q6PIL6 250 aa12.78□□□□□ -0.36
PDGFB-201ENST00000331163 BEX4Q9NWD9 120 aaPredicted RBP12.78□□□□□ -0.36
PDGFB-201ENST00000331163 CCDC144NLQ6NUI1 221 aa12.77□□□□□ -0.36
PDGFB-201ENST00000331163 BAGE3Q86Y29 109 aa12.77□□□□□ -0.36
PDGFB-201ENST00000331163 BAGE2Q86Y30 109 aa12.77□□□□□ -0.36
PDGFB-201ENST00000331163 OR10G4Q8NGN3 311 aa12.77□□□□□ -0.36
PDGFB-201ENST00000331163 OR10G9Q8NGN4 311 aa12.77□□□□□ -0.36
PDGFB-201ENST00000331163 OR10G7Q8NGN6 311 aa12.77□□□□□ -0.36
PDGFB-201ENST00000331163 C10orf105Q8TEF2 133 aa12.77□□□□□ -0.36
PDGFB-201ENST00000331163 C2CD3Q4AC94 2353 aa12.77□□□□□ -0.37
PDGFB-201ENST00000331163 IGHV2-70DA0A0C4DH43 119 aa12.77□□□□□ -0.37
PDGFB-201ENST00000331163 OR2J3O76001 311 aa12.77□□□□□ -0.37
PDGFB-201ENST00000331163 SUB1P53999 127 aaKnown RBP eCLIP12.77□□□□□ -0.37
PDGFB-201ENST00000331163 DYNAPQ8N1N2 210 aa12.77□□□□□ -0.37
PDGFB-201ENST00000331163 BEND2Q8NDZ0 799 aa12.77□□□□□ -0.37
PDGFB-201ENST00000331163 DERL1Q9BUN8 251 aa12.77□□□□□ -0.37
PDGFB-201ENST00000331163 E7EUB6 86 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 ZNF207O43670 478 aaKnown RBP12.76□□□□□ -0.37
PDGFB-201ENST00000331163 CD1BP29016 333 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 HSPB9Q9BQS6 159 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 MANBALQ9NQG1 85 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 CUBNO60494 3623 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 TEX50A0A1B0GTY4 177 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 NPFFO15130 113 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 DLEU1O43261 78 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms