RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 DHRS13Q6UX07 377 aa16.81■□□□□ 0.28
CMTM4-201ENST00000330687 ACP7Q6ZNF0 438 aa16.81■□□□□ 0.28
CMTM4-201ENST00000330687 ZNRF1Q8ND25 227 aa16.81■□□□□ 0.28
CMTM4-201ENST00000330687 TIMM8AO60220 97 aaPredicted RBP16.8■□□□□ 0.28
CMTM4-201ENST00000330687 ZNF134P52741 427 aa16.8■□□□□ 0.28
CMTM4-201ENST00000330687 RBMXL3Q8N7X1 1067 aaKnown RBP16.8■□□□□ 0.28
CMTM4-201ENST00000330687 SLC25A33Q9BSK2 321 aa16.8■□□□□ 0.28
CMTM4-201ENST00000330687 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.8■□□□□ 0.28
CMTM4-201ENST00000330687 SRFP11831 508 aa16.8■□□□□ 0.28
CMTM4-201ENST00000330687 MPV17P39210 176 aa16.8■□□□□ 0.28
CMTM4-201ENST00000330687 LGALS7P47929 136 aa16.8■□□□□ 0.28
CMTM4-201ENST00000330687 RPS20P60866 119 aaKnown RBP16.8■□□□□ 0.28
CMTM4-201ENST00000330687 COL5A1P20908 1838 aaPredicted RBP16.8■□□□□ 0.28
CMTM4-201ENST00000330687 TRAV8-1A0A0A6YYK1 113 aa16.8■□□□□ 0.28
CMTM4-201ENST00000330687 CFHR5Q9BXR6 569 aa16.8■□□□□ 0.28
CMTM4-201ENST00000330687 ZDBF2Q9HCK1 2354 aa16.8■□□□□ 0.28
CMTM4-201ENST00000330687 NCOR1O75376 2440 aa16.79■□□□□ 0.28
CMTM4-201ENST00000330687 ZNRD1Q9P1U0 126 aa16.79■□□□□ 0.28
CMTM4-201ENST00000330687 C9orf118A6NHY6 69 aa16.79■□□□□ 0.28
CMTM4-201ENST00000330687 ERVK11-1P61568 191 aa16.79■□□□□ 0.28
CMTM4-201ENST00000330687 SSBP2P81877 361 aaPredicted RBP16.79■□□□□ 0.28
CMTM4-201ENST00000330687 KLF5Q13887 457 aaPredicted RBP16.79■□□□□ 0.28
CMTM4-201ENST00000330687 C2orf91Q6ZV80 131 aa16.79■□□□□ 0.28
CMTM4-201ENST00000330687 LRRC29Q8WV35 223 aa16.79■□□□□ 0.28
CMTM4-201ENST00000330687 MBD6Q96DN6 1003 aa16.79■□□□□ 0.28
CMTM4-201ENST00000330687 AP5S1Q9NUS5 200 aa16.79■□□□□ 0.28
CMTM4-201ENST00000330687 AGFG2O95081 481 aa16.79■□□□□ 0.28
CMTM4-201ENST00000330687 EIF4EBP1Q13541 118 aaPredicted RBP16.79■□□□□ 0.28
CMTM4-201ENST00000330687 ADTRPQ96IZ2 230 aa16.79■□□□□ 0.28
CMTM4-201ENST00000330687 TNRC6AQ8NDV7 1962 aaKnown RBP16.78■□□□□ 0.28
CMTM4-201ENST00000330687 CACNA1GO43497 2377 aa16.78■□□□□ 0.28
CMTM4-201ENST00000330687 FABP2P12104 132 aa16.78■□□□□ 0.28
CMTM4-201ENST00000330687 ACP1P24666 158 aa16.78■□□□□ 0.28
CMTM4-201ENST00000330687 COL8A1P27658 744 aa16.78■□□□□ 0.28
CMTM4-201ENST00000330687 LINC00322Q6ZN03 302 aaPredicted RBP16.78■□□□□ 0.28
CMTM4-201ENST00000330687 DEFB108BQ8NET1 73 aa16.78■□□□□ 0.28
CMTM4-201ENST00000330687 H1FXQ92522 213 aaKnown RBP16.78■□□□□ 0.28
CMTM4-201ENST00000330687 FAM173AQ9BQD7 235 aa16.78■□□□□ 0.28
CMTM4-201ENST00000330687 SLC25A10Q9UBX3 287 aaPredicted RBP16.78■□□□□ 0.28
CMTM4-201ENST00000330687 TSSC4Q9Y5U2 329 aaPredicted RBP16.78■□□□□ 0.28
CMTM4-201ENST00000330687 MUC3AQ02505 3323 aa16.78■□□□□ 0.28
CMTM4-201ENST00000330687 K7EP34 96 aa16.78■□□□□ 0.28
CMTM4-201ENST00000330687 IGLV3-19P01714 112 aa16.78■□□□□ 0.28
CMTM4-201ENST00000330687 C15orf61A6NNL5 157 aa16.77■□□□□ 0.28
CMTM4-201ENST00000330687 KLF7O75840 302 aaPredicted RBP16.77■□□□□ 0.28
CMTM4-201ENST00000330687 COX8AP10176 69 aa16.77■□□□□ 0.28
CMTM4-201ENST00000330687 GUCD1Q96NT3 240 aa16.77■□□□□ 0.28
CMTM4-201ENST00000330687 ASPMQ8IZT6 3477 aa16.77■□□□□ 0.28
CMTM4-201ENST00000330687 A8MWL6 223 aa16.77■□□□□ 0.28
CMTM4-201ENST00000330687 SEC11AP67812 179 aa16.77■□□□□ 0.28
CMTM4-201ENST00000330687 FAM162BQ5T6X4 162 aa16.77■□□□□ 0.28
CMTM4-201ENST00000330687 SPTBN2O15020 2390 aa16.77■□□□□ 0.28
CMTM4-201ENST00000330687 SP1P08047 785 aa16.77■□□□□ 0.27
CMTM4-201ENST00000330687 A1L4Q6 167 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 K7ERJ3 54 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 ADH4P08319 380 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 BMI1P35226 326 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 C10orf113Q5VZT2 155 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 PET117Q6UWS5 81 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 SIGMAR1Q99720 223 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 NCKAP5O14513 1909 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 TMSB15BA0A087X1C1 80 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 CACNG7P62955 275 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 FAM201AQ5SY85 155 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 VSTM2AQ8TAG5 236 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 TTTY13Q9BZ97 58 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 MOSP00540 346 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 C1orf229Q6ZS94 237 aaPredicted RBP16.76■□□□□ 0.27
CMTM4-201ENST00000330687 PDPNQ86YL7 162 aa16.76■□□□□ 0.27
CMTM4-201ENST00000330687 RPP21Q9H633 154 aaKnown RBP16.76■□□□□ 0.27
CMTM4-201ENST00000330687 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.75■□□□□ 0.27
CMTM4-201ENST00000330687 A0A1W2PRD5 423 aa16.75■□□□□ 0.27
CMTM4-201ENST00000330687 A0A1W2PRF3 423 aa16.75■□□□□ 0.27
CMTM4-201ENST00000330687 A0A1W2PRM7 423 aa16.75■□□□□ 0.27
CMTM4-201ENST00000330687 GTSF1Q8WW33 167 aa16.75■□□□□ 0.27
CMTM4-201ENST00000330687 NPIPB3Q92617 1050 aa16.75■□□□□ 0.27
CMTM4-201ENST00000330687 NPFFR1Q9GZQ6 430 aa16.75■□□□□ 0.27
CMTM4-201ENST00000330687 TIMM23BQ5SRD1 257 aa16.75■□□□□ 0.27
CMTM4-201ENST00000330687 DEFB127Q9H1M4 99 aa16.75■□□□□ 0.27
CMTM4-201ENST00000330687 PPIAL4EA0A075B759 164 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 TEX50A0A1B0GTY4 177 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 FAM106CPP0CH98 169 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 PPIAL4FP0DN26 164 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 TMPRSS3P57727 454 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 FAM106AQ4KMX7 169 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 PCP2Q8IVA1 136 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 BOKQ9UMX3 212 aaPredicted RBP16.74■□□□□ 0.27
CMTM4-201ENST00000330687 ZFHX4Q86UP3 3567 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 PKDREJQ9NTG1 2253 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 TMEM265A0A087WTH1 108 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 OR2J3O76001 311 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 C18orf15Q96N68 181 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 SLC25A2Q9BXI2 301 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 WNK2Q9Y3S1 2297 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 FCER1GP30273 86 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 CHCHD1Q96BP2 118 aaKnown RBP16.74■□□□□ 0.27
CMTM4-201ENST00000330687 SH3BGRL2Q9UJC5 107 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 GVINP1Q7Z2Y8 2422 aa16.74■□□□□ 0.27
CMTM4-201ENST00000330687 A0A1B0GV72 72 aa16.73■□□□□ 0.27
CMTM4-201ENST00000330687 PRDX2P32119 198 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms