RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OR10G7Q8NGN6 311 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 ABHD5Q8WTS1 349 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 ARPC1AQ92747 370 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 RBM14Q96PK6 669 aaKnown RBP12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 MGST2Q99735 147 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 GGTLC1Q9BX51 225 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 NPFFR1Q9GZQ6 430 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 SLC39A9Q9NUM3 307 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 SEC14L6B5MCN3 397 aa12.9□□□□□ -0.34
PDLIM1-201ENST00000329399 PPT1P50897 306 aa12.9□□□□□ -0.34
PDLIM1-201ENST00000329399 SSBP2P81877 361 aaPredicted RBP12.9□□□□□ -0.34
PDLIM1-201ENST00000329399 C11orf44Q8N8P7 122 aa12.9□□□□□ -0.34
PDLIM1-201ENST00000329399 THAP8Q8NA92 274 aa12.9□□□□□ -0.34
PDLIM1-201ENST00000329399 TMEM116Q8NCL8 245 aa12.9□□□□□ -0.34
PDLIM1-201ENST00000329399 SFT2D1Q8WV19 159 aa12.9□□□□□ -0.34
PDLIM1-201ENST00000329399 SLC25A33Q9BSK2 321 aa12.9□□□□□ -0.34
PDLIM1-201ENST00000329399 THYN1Q9P016 225 aa12.9□□□□□ -0.34
PDLIM1-201ENST00000329399 MOB4Q9Y3A3 225 aa12.9□□□□□ -0.34
PDLIM1-201ENST00000329399 CD5P06127 495 aa12.89□□□□□ -0.35
PDLIM1-201ENST00000329399 HIST1H1BP16401 226 aaKnown RBP12.89□□□□□ -0.35
PDLIM1-201ENST00000329399 FHITP49789 147 aa12.89□□□□□ -0.35
PDLIM1-201ENST00000329399 KLK9Q2XQG4 91 aa12.89□□□□□ -0.35
PDLIM1-201ENST00000329399 RCC1LQ96I51 464 aaKnown RBP12.89□□□□□ -0.35
PDLIM1-201ENST00000329399 RNF2Q99496 336 aa12.89□□□□□ -0.35
PDLIM1-201ENST00000329399 KLK9Q9UKQ9 250 aa12.89□□□□□ -0.35
PDLIM1-201ENST00000329399 SLC45A2Q9UMX9 530 aa12.89□□□□□ -0.35
PDLIM1-201ENST00000329399 PXMP4Q9Y6I8 212 aa12.89□□□□□ -0.35
PDLIM1-201ENST00000329399 MEGF8Q7Z7M0 2845 aa12.89□□□□□ -0.35
PDLIM1-201ENST00000329399 MT-CO2P00403 227 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 IFNA1P01562 189 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 DEFA4P12838 97 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 AREGP15514 252 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 B2MP61769 119 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 PRR20EP86478 221 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 PRR20CP86479 221 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 PRR20DP86480 221 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 PRR20BP86481 221 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 PRR20AP86496 221 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 TOR2AQ5JU69 321 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 ACSM6Q6P461 480 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 KLHDC1Q8N7A1 406 aa12.88□□□□□ -0.35
PDLIM1-201ENST00000329399 A0A1W2PPV4 95 aa12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 SCGB2A1O75556 95 aa12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 FABP1P07148 127 aa12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 ELLP55199 621 aaPredicted RBP12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 GUK1Q16774 197 aa12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 SPSB3Q6PJ21 355 aa12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 RPP25LQ8N5L8 163 aaKnown RBP12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 OR2T6Q8NHC8 308 aa12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 SGMS2Q8NHU3 365 aa12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 WIPF2Q8TF74 440 aaPredicted RBP12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 PRSS22Q9GZN4 317 aa12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 WNT10AQ9GZT5 417 aa12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 NOTCH3Q9UM47 2321 aa12.87□□□□□ -0.35
PDLIM1-201ENST00000329399 IGHV7-81A0A0B4J1V7 117 aa12.86□□□□□ -0.35
PDLIM1-201ENST00000329399 TMEM218A2RU14 115 aa12.86□□□□□ -0.35
PDLIM1-201ENST00000329399 CDC34P49427 236 aaPredicted RBP12.86□□□□□ -0.35
PDLIM1-201ENST00000329399 RHOBP62745 196 aa12.86□□□□□ -0.35
PDLIM1-201ENST00000329399 C10orf99Q6UWK7 81 aa12.86□□□□□ -0.35
PDLIM1-201ENST00000329399 C5orf56Q8N8D9 126 aa12.86□□□□□ -0.35
PDLIM1-201ENST00000329399 MISP3Q96FF7 219 aa12.86□□□□□ -0.35
PDLIM1-201ENST00000329399 TRGV9Q99603 122 aa12.86□□□□□ -0.35
PDLIM1-201ENST00000329399 TREM1Q9NP99 234 aa12.86□□□□□ -0.35
PDLIM1-201ENST00000329399 RFNGQ9Y644 331 aa12.86□□□□□ -0.35
PDLIM1-201ENST00000329399 TRAV30A0A087WSZ9 112 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 TCRBV4S1A1TA0A5B7 111 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 MAP1LC3B2A6NCE7 125 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 LINC01548A6NM66 108 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 PSMB3P49720 205 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 CRIP2P52943 208 aaPredicted RBP12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 AKIRIN2Q53H80 203 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 KHDC3LQ587J8 217 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 CYP2G1PQ6ZSU1 146 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 STPG3Q8N7X2 389 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 BPIFCQ8NFQ6 507 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 OR4X1Q8NH49 305 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 PFDN5Q99471 154 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 MAP1LC3BQ9GZQ8 125 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 EIF5A2Q9GZV4 153 aaKnown RBP12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 RBFOX3A6NFN3 312 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 REG1AP05451 166 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 CD28P10747 220 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 OR1L4Q8NGR5 311 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 SUN5Q8TC36 379 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 GATAD1Q8WUU5 269 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 NPIPB3Q92617 1050 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 ACY3Q96HD9 319 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 TXNDC17Q9BRA2 123 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 SEC11CQ9BY50 192 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 VSIRQ9H7M9 311 aa12.85□□□□□ -0.35
PDLIM1-201ENST00000329399 PLXNB1O43157 2135 aa12.84□□□□□ -0.35
PDLIM1-201ENST00000329399 I3L2K1 104 aa12.84□□□□□ -0.35
PDLIM1-201ENST00000329399 YIF1AO95070 293 aa12.84□□□□□ -0.35
PDLIM1-201ENST00000329399 HSPB1P04792 205 aaKnown RBP12.84□□□□□ -0.35
PDLIM1-201ENST00000329399 LINC00869P0C866 280 aa12.84□□□□□ -0.35
PDLIM1-201ENST00000329399 OR10J1P30954 320 aa12.84□□□□□ -0.35
PDLIM1-201ENST00000329399 ZNF726P1Q15940 193 aa12.84□□□□□ -0.35
PDLIM1-201ENST00000329399 PRR31Q5SQ13 230 aa12.84□□□□□ -0.35
PDLIM1-201ENST00000329399 C10orf91Q5T1B1 145 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms