RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ASAH1Q13510 395 aa20.62■□□□□ 0.89
ATPAF1-201ENST00000329231 MZT2BQ6NZ67 158 aa20.62■□□□□ 0.89
ATPAF1-201ENST00000329231 CITED4Q96RK1 184 aa20.62■□□□□ 0.89
ATPAF1-201ENST00000329231 RBKSQ9H477 322 aa20.62■□□□□ 0.89
ATPAF1-201ENST00000329231 ZFAND3Q9H8U3 227 aa20.62■□□□□ 0.89
ATPAF1-201ENST00000329231 CD5P06127 495 aa20.61■□□□□ 0.89
ATPAF1-201ENST00000329231 COQ8AQ8NI60 647 aa20.61■□□□□ 0.89
ATPAF1-201ENST00000329231 TMEM170AQ8WVE7 144 aa20.61■□□□□ 0.89
ATPAF1-201ENST00000329231 C3orf84H3BNL1 204 aa20.6■□□□□ 0.89
ATPAF1-201ENST00000329231 PITX3O75364 302 aa20.6■□□□□ 0.89
ATPAF1-201ENST00000329231 HOXB5P09067 269 aa20.6■□□□□ 0.89
ATPAF1-201ENST00000329231 PRSS54Q6PEW0 395 aa20.6■□□□□ 0.89
ATPAF1-201ENST00000329231 IGHV3OR16-13A0A075B7E8 117 aa20.59■□□□□ 0.89
ATPAF1-201ENST00000329231 IGHV3-74A0A0B4J1X5 117 aa20.59■□□□□ 0.89
ATPAF1-201ENST00000329231 FAM240BA0A1B0GVZ2 78 aa20.59■□□□□ 0.89
ATPAF1-201ENST00000329231 IGKV1-17P01599 117 aa20.59■□□□□ 0.89
ATPAF1-201ENST00000329231 RND2P52198 227 aa20.59■□□□□ 0.89
ATPAF1-201ENST00000329231 ATP5IP56385 69 aaPredicted RBP20.59■□□□□ 0.89
ATPAF1-201ENST00000329231 OR1S2Q8NGQ3 325 aa20.59■□□□□ 0.89
ATPAF1-201ENST00000329231 MUC7Q8TAX7 377 aa20.59■□□□□ 0.89
ATPAF1-201ENST00000329231 GGTLC1Q9BX51 225 aa20.59■□□□□ 0.89
ATPAF1-201ENST00000329231 NUDT15Q9NV35 164 aa20.59■□□□□ 0.89
ATPAF1-201ENST00000329231 TRAV6A0A075B6T7 132 aa20.58■□□□□ 0.89
ATPAF1-201ENST00000329231 LOC102724200A0A096LPH7 203 aaPredicted RBP20.58■□□□□ 0.89
ATPAF1-201ENST00000329231 TIGITQ495A1 244 aa20.58■□□□□ 0.89
ATPAF1-201ENST00000329231 GGNBP1Q5YKI7 109 aa20.58■□□□□ 0.89
ATPAF1-201ENST00000329231 FAM110AQ9BQ89 295 aa20.58■□□□□ 0.89
ATPAF1-201ENST00000329231 TMEM231Q9H6L2 316 aa20.58■□□□□ 0.89
ATPAF1-201ENST00000329231 VSIRQ9H7M9 311 aa20.58■□□□□ 0.89
ATPAF1-201ENST00000329231 UBQLN2Q9UHD9 624 aa20.58■□□□□ 0.89
ATPAF1-201ENST00000329231 NPPCP23582 126 aa20.57■□□□□ 0.88
ATPAF1-201ENST00000329231 IFITM3Q01628 133 aa20.57■□□□□ 0.88
ATPAF1-201ENST00000329231 FAM90A2PQ658T7 463 aa20.57■□□□□ 0.88
ATPAF1-201ENST00000329231 ST8SIA2Q92186 375 aa20.57■□□□□ 0.88
ATPAF1-201ENST00000329231 METTL26Q96S19 204 aa20.57■□□□□ 0.88
ATPAF1-201ENST00000329231 FAM90A26D6RGX4 464 aa20.56■□□□□ 0.88
ATPAF1-201ENST00000329231 IGLC1P0CG04 106 aa20.56■□□□□ 0.88
ATPAF1-201ENST00000329231 OR10J1P30954 320 aa20.56■□□□□ 0.88
ATPAF1-201ENST00000329231 PAFAH1B2P68402 229 aa20.56■□□□□ 0.88
ATPAF1-201ENST00000329231 ODF3L2Q3SX64 289 aa20.56■□□□□ 0.88
ATPAF1-201ENST00000329231 TCF24Q7RTU0 167 aa20.56■□□□□ 0.88
ATPAF1-201ENST00000329231 RETNQ9HD89 108 aa20.56■□□□□ 0.88
ATPAF1-201ENST00000329231 A0A1W2PS18 150 aa20.55■□□□□ 0.88
ATPAF1-201ENST00000329231 ADAP1O75689 374 aa20.55■□□□□ 0.88
ATPAF1-201ENST00000329231 APOHP02749 345 aaPredicted RBP20.55■□□□□ 0.88
ATPAF1-201ENST00000329231 IFNA4P05014 189 aa20.55■□□□□ 0.88
ATPAF1-201ENST00000329231 H2AFB2P0C5Z0 115 aa20.55■□□□□ 0.88
ATPAF1-201ENST00000329231 CMC4P56277 68 aaPredicted RBP20.55■□□□□ 0.88
ATPAF1-201ENST00000329231 YPEL3P61236 119 aaPredicted RBP20.55■□□□□ 0.88
ATPAF1-201ENST00000329231 MITD1Q8WV92 249 aa20.55■□□□□ 0.88
ATPAF1-201ENST00000329231 IGKV3-7A0A075B6H7 116 aa20.54■□□□□ 0.88
ATPAF1-201ENST00000329231 MED6O75586 246 aa20.54■□□□□ 0.88
ATPAF1-201ENST00000329231 IFNA21P01568 189 aa20.54■□□□□ 0.88
ATPAF1-201ENST00000329231 Q8WTZ3 238 aa20.54■□□□□ 0.88
ATPAF1-201ENST00000329231 NPIPB3Q92617 1050 aa20.54■□□□□ 0.88
ATPAF1-201ENST00000329231 ACY3Q96HD9 319 aa20.54■□□□□ 0.88
ATPAF1-201ENST00000329231 NARS2Q96I59 477 aaKnown RBP20.54■□□□□ 0.88
ATPAF1-201ENST00000329231 EDA2RQ9HAV5 297 aa20.54■□□□□ 0.88
ATPAF1-201ENST00000329231 IGHV3-66A0A0C4DH42 116 aa20.53■□□□□ 0.88
ATPAF1-201ENST00000329231 CRYBB3P26998 211 aa20.53■□□□□ 0.88
ATPAF1-201ENST00000329231 TFPI2P48307 235 aa20.53■□□□□ 0.88
ATPAF1-201ENST00000329231 DFFBO76075 338 aa20.52■□□□□ 0.88
ATPAF1-201ENST00000329231 LILRB2Q8N423 598 aa20.52■□□□□ 0.88
ATPAF1-201ENST00000329231 GBGT1Q8N5D6 347 aa20.52■□□□□ 0.88
ATPAF1-201ENST00000329231 ENKURQ8TC29 256 aa20.52■□□□□ 0.88
ATPAF1-201ENST00000329231 CIB3Q96Q77 187 aaPredicted RBP20.52■□□□□ 0.88
ATPAF1-201ENST00000329231 GPX4P36969 197 aaPredicted RBP20.51■□□□□ 0.87
ATPAF1-201ENST00000329231 RPL11P62913 178 aaKnown RBP20.51■□□□□ 0.87
ATPAF1-201ENST00000329231 DNASE2O00115 360 aaPredicted RBP20.5■□□□□ 0.87
ATPAF1-201ENST00000329231 IAPPP10997 89 aa20.5■□□□□ 0.87
ATPAF1-201ENST00000329231 LYL1P12980 280 aa20.5■□□□□ 0.87
ATPAF1-201ENST00000329231 APOC4P55056 127 aa20.5■□□□□ 0.87
ATPAF1-201ENST00000329231 RAB11AP62491 216 aa20.5■□□□□ 0.87
ATPAF1-201ENST00000329231 ZNF431Q8TF32 576 aaPredicted RBP20.5■□□□□ 0.87
ATPAF1-201ENST00000329231 GRAMD2BQ96HH9 432 aa20.5■□□□□ 0.87
ATPAF1-201ENST00000329231 MPTX1A8MV57 137 aa20.49■□□□□ 0.87
ATPAF1-201ENST00000329231 SYNGR2O43760 224 aa20.49■□□□□ 0.87
ATPAF1-201ENST00000329231 RPP30P78346 268 aaKnown RBP20.49■□□□□ 0.87
ATPAF1-201ENST00000329231 SEC22CQ9BRL7 303 aa20.49■□□□□ 0.87
ATPAF1-201ENST00000329231 MS4A6AQ9H2W1 248 aa20.49■□□□□ 0.87
ATPAF1-201ENST00000329231 TRAV2A0A0B4J234 112 aa20.48■□□□□ 0.87
ATPAF1-201ENST00000329231 TOMM40O96008 361 aa20.48■□□□□ 0.87
ATPAF1-201ENST00000329231 RD3LP0DJH9 198 aa20.48■□□□□ 0.87
ATPAF1-201ENST00000329231 DEFA1P59665 94 aa20.48■□□□□ 0.87
ATPAF1-201ENST00000329231 DEFA3P59666 94 aa20.48■□□□□ 0.87
ATPAF1-201ENST00000329231 WFDC3Q8IUB2 231 aa20.48■□□□□ 0.87
ATPAF1-201ENST00000329231 SLC35E1Q96K37 410 aa20.48■□□□□ 0.87
ATPAF1-201ENST00000329231 MAGT1Q9H0U3 335 aa20.48■□□□□ 0.87
ATPAF1-201ENST00000329231 IL4P05112 153 aa20.47■□□□□ 0.87
ATPAF1-201ENST00000329231 HNRNPCP07910 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
ATPAF1-201ENST00000329231 P2RY1P47900 373 aa20.47■□□□□ 0.87
ATPAF1-201ENST00000329231 CASC10Q5T4H9 136 aa20.47■□□□□ 0.87
ATPAF1-201ENST00000329231 APRG1Q8IVJ8 170 aa20.47■□□□□ 0.87
ATPAF1-201ENST00000329231 PAIP2BQ9ULR5 123 aaKnown RBP20.47■□□□□ 0.87
ATPAF1-201ENST00000329231 NBEAL2Q6ZNJ1 2754 aa20.47■□□□□ 0.87
ATPAF1-201ENST00000329231 KIR2DL5BA0A0G2JN68 375 aa20.46■□□□□ 0.87
ATPAF1-201ENST00000329231 KIR2DL5BA0A0G2JPC4 375 aa20.46■□□□□ 0.87
ATPAF1-201ENST00000329231 UBE2CO00762 179 aa20.46■□□□□ 0.87
ATPAF1-201ENST00000329231 ID3Q02535 119 aa20.46■□□□□ 0.87
ATPAF1-201ENST00000329231 GAMTQ14353 236 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms