RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 IGHV7-81A0A0B4J1V7 117 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 A0A1W2PPV4 95 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 CNIH1O95406 144 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 BCL2P10415 239 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 AREGP15514 252 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 TAGLN2P37802 199 aaKnown RBP14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 F11RQ9Y624 299 aaKnown RBP14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 IGKV1OR2-108A0A075B7D4 117 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 M0QZK8 103 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 CRLF1O75462 422 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 REG1AP05451 166 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 SRP19P09132 144 aaKnown RBP14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 FXYD3Q14802 87 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 MLANAQ16655 118 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 ZNF562Q6V9R5 426 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 FNDC4Q9H6D8 234 aaPredicted RBP14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 VAX2Q9UIW0 290 aa14.78□□□□□ -0.04
EXOSC3-201ENST00000327304 ZFP92A6NM28 416 aa14.77□□□□□ -0.05
EXOSC3-201ENST00000327304 LINC00869P0C866 280 aa14.77□□□□□ -0.05
EXOSC3-201ENST00000327304 BLCAPP62952 87 aa14.77□□□□□ -0.05
EXOSC3-201ENST00000327304 GCSAMLQ5JQS6 135 aa14.77□□□□□ -0.05
EXOSC3-201ENST00000327304 RXFP4Q8TDU9 374 aa14.77□□□□□ -0.05
EXOSC3-201ENST00000327304 NDUFS6O75380 124 aaKnown RBP14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 CRYGCP07315 174 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 ZNF418Q8TF45 676 aaPredicted RBP14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 ARPC1AQ92747 370 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 FAM103A1Q9BTL3 118 aaKnown RBP14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 MANBALQ9NQG1 85 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 LINC01548A6NM66 108 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 APELAP0DMC3 54 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 OR10J1P30954 320 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 PSMB3P49720 205 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 MFAP2P55001 183 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 C9orf152Q5JTZ5 239 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 SOHLH1Q5JUK2 328 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 Q6ZS46 218 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 SLC35E3Q7Z769 313 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 THAP8Q8NA92 274 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 OR2T6Q8NHC8 308 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 C19orf24Q9BVV8 132 aa14.76□□□□□ -0.05
EXOSC3-201ENST00000327304 CUBNO60494 3623 aa14.75□□□□□ -0.05
EXOSC3-201ENST00000327304 RHOBP62745 196 aa14.75□□□□□ -0.05
EXOSC3-201ENST00000327304 BTN1A1Q13410 526 aa14.75□□□□□ -0.05
EXOSC3-201ENST00000327304 OR1L6Q8NGR2 347 aa14.75□□□□□ -0.05
EXOSC3-201ENST00000327304 ABHD5Q8WTS1 349 aa14.75□□□□□ -0.05
EXOSC3-201ENST00000327304 ACY3Q96HD9 319 aa14.75□□□□□ -0.05
EXOSC3-201ENST00000327304 HMGB3O15347 200 aaKnown RBP14.74□□□□□ -0.05
EXOSC3-201ENST00000327304 STAG3L2P0CL84 134 aa14.74□□□□□ -0.05
EXOSC3-201ENST00000327304 STAG3L3P0CL85 134 aa14.74□□□□□ -0.05
EXOSC3-201ENST00000327304 EGR2P11161 476 aaPredicted RBP14.74□□□□□ -0.05
EXOSC3-201ENST00000327304 CYP2G1PQ6ZSU1 146 aa14.74□□□□□ -0.05
EXOSC3-201ENST00000327304 MISP3Q96FF7 219 aa14.74□□□□□ -0.05
EXOSC3-201ENST00000327304 EIF3GO75821 320 aaKnown RBP eCLIP14.73□□□□□ -0.05
EXOSC3-201ENST00000327304 CTRB1P17538 263 aa14.73□□□□□ -0.05
EXOSC3-201ENST00000327304 HILS1P60008 231 aa14.73□□□□□ -0.05
EXOSC3-201ENST00000327304 CTRB2Q6GPI1 263 aa14.73□□□□□ -0.05
EXOSC3-201ENST00000327304 CLRN3Q8NCR9 226 aa14.73□□□□□ -0.05
EXOSC3-201ENST00000327304 NPIPB3Q92617 1050 aa14.73□□□□□ -0.05
EXOSC3-201ENST00000327304 CLDN34H7C241 214 aa14.73□□□□□ -0.05
EXOSC3-201ENST00000327304 ATP6V0E1O15342 81 aa14.73□□□□□ -0.05
EXOSC3-201ENST00000327304 DEFA4P12838 97 aa14.73□□□□□ -0.05
EXOSC3-201ENST00000327304 TMEM116Q8NCL8 245 aa14.73□□□□□ -0.05
EXOSC3-201ENST00000327304 TMPRSS5Q9H3S3 457 aa14.73□□□□□ -0.05
EXOSC3-201ENST00000327304 TCRBV4S1A1TA0A5B7 111 aa14.72□□□□□ -0.05
EXOSC3-201ENST00000327304 CXorf1O96002 111 aa14.72□□□□□ -0.05
EXOSC3-201ENST00000327304 NPBWR1P48145 328 aa14.72□□□□□ -0.05
EXOSC3-201ENST00000327304 SELENOTP62341 195 aa14.72□□□□□ -0.05
EXOSC3-201ENST00000327304 NF1P21359 2839 aa14.72□□□□□ -0.05
EXOSC3-201ENST00000327304 MT-CO2P00403 227 aa14.71□□□□□ -0.05
EXOSC3-201ENST00000327304 IGHG2P01859 326 aa14.71□□□□□ -0.05
EXOSC3-201ENST00000327304 MEF2BQ02080 365 aaPredicted RBP14.71□□□□□ -0.05
EXOSC3-201ENST00000327304 ASPHD1Q5U4P2 390 aa14.71□□□□□ -0.05
EXOSC3-201ENST00000327304 C19orf35Q6ZS72 473 aa14.71□□□□□ -0.05
EXOSC3-201ENST00000327304 CYB561D1Q8N8Q1 229 aa14.71□□□□□ -0.05
EXOSC3-201ENST00000327304 NPFFR1Q9GZQ6 430 aa14.71□□□□□ -0.05
EXOSC3-201ENST00000327304 WNT10AQ9GZT5 417 aa14.71□□□□□ -0.05
EXOSC3-201ENST00000327304 IGKV1D-37A0A075B6S9 117 aa14.71□□□□□ -0.06
EXOSC3-201ENST00000327304 FAM181BA6NEQ2 426 aa14.71□□□□□ -0.06
EXOSC3-201ENST00000327304 NPIPB5A8MRT5 1133 aa14.71□□□□□ -0.06
EXOSC3-201ENST00000327304 DNASE2O00115 360 aaPredicted RBP14.71□□□□□ -0.06
EXOSC3-201ENST00000327304 RND2P52198 227 aa14.71□□□□□ -0.06
EXOSC3-201ENST00000327304 RNF2Q99496 336 aa14.71□□□□□ -0.06
EXOSC3-201ENST00000327304 SEPSECSQ9HD40 501 aaKnown RBP14.71□□□□□ -0.06
EXOSC3-201ENST00000327304 DMRT1Q9Y5R6 373 aa14.71□□□□□ -0.06
EXOSC3-201ENST00000327304 RNASE1P07998 156 aaKnown RBP14.7□□□□□ -0.06
EXOSC3-201ENST00000327304 TMEM95Q3KNT9 176 aa14.7□□□□□ -0.06
EXOSC3-201ENST00000327304 SGMS2Q8NHU3 365 aa14.7□□□□□ -0.06
EXOSC3-201ENST00000327304 GATAD1Q8WUU5 269 aa14.7□□□□□ -0.06
EXOSC3-201ENST00000327304 TRGV9Q99603 122 aa14.7□□□□□ -0.06
EXOSC3-201ENST00000327304 ZNF702PQ9H963 129 aa14.7□□□□□ -0.06
EXOSC3-201ENST00000327304 MRPL36Q9P0J6 103 aaKnown RBP14.7□□□□□ -0.06
EXOSC3-201ENST00000327304 LINC00527Q9UJ94 153 aa14.7□□□□□ -0.06
EXOSC3-201ENST00000327304 FUT9Q9Y231 359 aa14.7□□□□□ -0.06
EXOSC3-201ENST00000327304 NIPBLQ6KC79 2804 aaeCLIP14.7□□□□□ -0.06
EXOSC3-201ENST00000327304 I3L2K1 104 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 OR5G3P0C626 314 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 ARL14EPLP0DKL9 152 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 CD81P60033 236 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 ECSCRQ19T08 205 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 FAM78BQ5VT40 261 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms