RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 OR1L4Q8NGR5 311 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 OSR1Q8TAX0 266 aaPredicted RBP10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 LINC00312Q9Y6C7 94 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 IGF2RP11717 2491 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 A0A1W2PN81 502 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 PEX7O00628 323 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 LHBP01229 141 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 RBP4P02753 201 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 CFHR2P36980 270 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 TMEM200BQ69YZ2 307 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 GFRALQ6UXV0 394 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 VSTM2AQ8TAG5 236 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 ASCL2Q99929 193 aa10.46□□□□□ -0.73
HMGCS1-201ENST00000325110 CORTO00230 105 aa10.46□□□□□ -0.74
HMGCS1-201ENST00000325110 CNIH1O95406 144 aa10.46□□□□□ -0.74
HMGCS1-201ENST00000325110 CRYABP02511 175 aaKnown RBP10.46□□□□□ -0.74
HMGCS1-201ENST00000325110 WT1-ASQ06250 92 aa10.46□□□□□ -0.74
HMGCS1-201ENST00000325110 TMEM249Q2WGJ8 235 aa10.46□□□□□ -0.74
HMGCS1-201ENST00000325110 C2orf83Q53S99 150 aa10.46□□□□□ -0.74
HMGCS1-201ENST00000325110 C11orf52Q96A22 123 aa10.46□□□□□ -0.74
HMGCS1-201ENST00000325110 FNDC4Q9H6D8 234 aaPredicted RBP10.46□□□□□ -0.74
HMGCS1-201ENST00000325110 OSTCQ9NRP0 149 aa10.46□□□□□ -0.74
HMGCS1-201ENST00000325110 S4R3C0 116 aa10.46□□□□□ -0.74
HMGCS1-201ENST00000325110 C17orf100A8MU93 164 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 HIGD1CA8MV81 97 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 H0YJW9 148 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 M0QZ24 198 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 GNB1LQ9BYB4 327 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 ZNF257Q9Y2Q1 563 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 RNF114Q9Y508 228 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 A0A1W2PRE2 83 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 BMPR1BO00238 502 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 GPX1P07203 203 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 CGB3P0DN86 165 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 CGB7P0DN87 165 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 SLAQ13239 276 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 PMCHL1Q16048 86 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 TPTE2P1Q5T6R2 138 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 IGLV3-9A0A075B6K5 115 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 PPOXP50336 477 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 TDGF1P3P51864 188 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 MMDQ15546 238 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 TMEM136Q6ZRR5 245 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 PGLYRP4Q96LB8 373 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 MIEN1Q9BRT3 115 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 BET1LQ9NYM9 111 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 WASHC3Q9Y3C0 194 aa10.45□□□□□ -0.74
HMGCS1-201ENST00000325110 LINC00310P59036 64 aa10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 ST6GALNAC6Q969X2 333 aa10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 KCNS1Q96KK3 526 aa10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 MRPL36Q9P0J6 103 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 DPRXA6NFQ7 191 aa10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 ZNF324O75467 553 aaPredicted RBP10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 HINT1P49773 126 aaPredicted RBP10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 NUDT10Q8NFP7 164 aa10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 NUDT11Q96G61 164 aa10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 A0A1W2PS18 150 aa10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 TM4SF5O14894 197 aa10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 AARDQ4LEZ3 155 aa10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 NEU1Q99519 415 aa10.44□□□□□ -0.74
HMGCS1-201ENST00000325110 TACC2O95359 2948 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 TRAV8-1A0A0A6YYK1 113 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 TRBV9A0A0B4J1U6 114 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 C3orf79P0CE67 100 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 FOSL1P15407 271 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 RPL27AP46776 148 aaKnown RBP10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 SELENOTP62341 195 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 ADIPOQQ15848 244 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 TBR1Q16650 682 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 RNF2Q99496 336 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 SLC25A2Q9BXI2 301 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 KIR2DL5BA0A0G2JN68 375 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 KIR2DL5BA0A0G2JPC4 375 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 CHEK1O14757 476 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 FAM87AP0C7U9 286 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 CNTFRP26992 372 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 HES1Q14469 280 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 MAJINQ3KP22 176 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 TMEM177Q53S58 311 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 KIR2DL5AQ8N109 375 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 OR4B1Q8NGF8 309 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 MRPL32Q9BYC8 188 aaKnown RBP10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 INSIG2Q9Y5U4 225 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 ARL2-SNX15V9GYD0 113 aa10.43□□□□□ -0.74
HMGCS1-201ENST00000325110 TRAV9-1A0A075B6T8 112 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 HIST1H1EP10412 219 aaKnown RBP10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 IGFBPL1Q8WX77 278 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 PERPQ96FX8 193 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 RITA1Q96K30 269 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 NDUFA4L2Q9NRX3 87 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 CLEC5AQ9NY25 188 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 GOLT1BQ9Y3E0 138 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 AKAP13Q12802 2813 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 A0A1W2PPI3 338 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 IZUMO1RA6ND01 250 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 SH2D7A6NKC9 451 aaPredicted RBP10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 P01737 135 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 NBEAP1P0C6P0 100 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 NUP35Q8NFH5 326 aa10.42□□□□□ -0.74
HMGCS1-201ENST00000325110 CACNG8Q8WXS5 425 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms