RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 M0R1B8 84 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 MT-ND6P03923 174 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 HIST1H1EP10412 219 aaKnown RBP7.71□□□□□ -1.18
CAPN3-201ENST00000318023 CRYBB3P26998 211 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 CX3CL1P78423 397 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 MALLQ13021 153 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 NRN1LQ496H8 165 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 H1FNTQ75WM6 255 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-201ENST00000318023 OR2D2Q9H210 308 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 SCRT2Q9NQ03 307 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 TRAV9-1A0A075B6T8 112 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-201ENST00000318023 RBMXL2O75526 392 aaKnown RBP7.7□□□□□ -1.18
CAPN3-201ENST00000318023 IGKV1-5P01602 117 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 B4GALT1P15291 398 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 IGFBP2P18065 325 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 LTC4SQ16873 150 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 OR2V2Q96R30 315 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 SSBP4Q9BWG4 385 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-201ENST00000318023 TNFRSF19Q9NS68 423 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 SERTAD4Q9NUC0 356 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 TIMM9Q9Y5J7 89 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 A0A1W2PPV4 95 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 ISLRO14498 428 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 RRHO14718 337 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 CEACAM16Q2WEN9 425 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 CD300EQ496F6 205 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-201ENST00000318023 ACP7Q6ZNF0 438 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 SSX8Q7RTT4 187 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 OSR2Q8N2R0 312 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 YTHDF2Q9Y5A9 579 aaKnown RBP7.7□□□□□ -1.18
CAPN3-201ENST00000318023 C2CD3Q4AC94 2353 aa7.7□□□□□ -1.18
CAPN3-201ENST00000318023 AMY1AP04745 511 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 THBDP07204 575 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 CCL2P13500 99 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 CCNOP22674 350 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 ATP5G2Q06055 141 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 KIR3DS1Q14943 382 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 C5orf64Q2M2E5 130 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 TMEM97Q5BJF2 176 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 C2orf91Q6ZV80 131 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 PP6455Q8WZ26 134 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 IGKV1-6A0A0C4DH72 117 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 HLA-DQA1P01909 254 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 SMIM17P0DL12 118 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 HERV-K104P63124 156 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 Q71RC1 249 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-201ENST00000318023 TMEM116Q8NCL8 245 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 NANOS1Q8WY41 292 aaKnown RBP7.69□□□□□ -1.18
CAPN3-201ENST00000318023 EAF1Q96JC9 268 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-201ENST00000318023 VWC2Q2TAL6 325 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 TMEM147Q9BVK8 224 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 SSBP3Q9BWW4 388 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-201ENST00000318023 KCNS2Q9ULS6 477 aa7.69□□□□□ -1.18
CAPN3-201ENST00000318023 CD24P25063 80 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 BSPH1Q075Z2 132 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 Q6ZT83 130 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 BPIFA4PQ86YQ2 179 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 MRAP2Q96G30 205 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 PGPEP1Q9NXJ5 209 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 FZR1Q9UM11 496 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 HCFC1P51610 2035 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 PSMB11A5LHX3 300 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 SYS1-DBNDD2H3BUS1 97 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 GPM6AP51674 278 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 TM4SF20Q53R12 229 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 TMEM14EPQ6UXP3 125 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 UBALD1Q8TB05 177 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 IL1F10Q8WWZ1 152 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 LSM10Q969L4 123 aaKnown RBP7.68□□□□□ -1.18
CAPN3-201ENST00000318023 ZDHHC16Q969W1 377 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 BORCS8Q96FH0 119 aa7.68□□□□□ -1.18
CAPN3-201ENST00000318023 ZNF469Q96JG9 3925 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-201ENST00000318023 LY6HO94772 140 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 CNIH1O95406 144 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 AESQ08117 197 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 GUSBP1Q15486 140 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 CENPWQ5EE01 88 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 ADAMTSL5Q6ZMM2 481 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 PQLC2Q6ZP29 291 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 MAPK1IP1LQ8NDC0 245 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 OR5A2Q8NGI9 324 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 VSTM2AQ8TAG5 236 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 NDUFS7O75251 213 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 SEC11AP67812 179 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 MTURNQ8N3F0 131 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 TPRX1Q8N7U7 411 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 NHLRC2Q8NBF2 726 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 OXGR1Q96P68 337 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 MTCH1Q9NZJ7 389 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 DYSFO75923 2080 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 DSCAMO60469 2012 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 A0A1W2PPM0 123 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 ZNF503-AS2A6NEH8 195 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 DEFB108AA8MXU0 73 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 H3BRM9 83 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 FOXA3P55318 350 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-201ENST00000318023 OR8B8Q15620 311 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 TCTEX1D4Q5JR98 221 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 FAM120AOSQ5T036 256 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms