RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 FAM157CP0CG43 387 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 RANP62826 216 aaKnown RBP6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 KLRD1Q13241 179 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 PRSS8Q16651 343 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 OR51M1Q9H341 326 aa6.96□□□□□ -1.3
PDLIM5-201ENST00000317968 IGHV2-5P01817 119 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 MST1LQ2TV78 715 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 C9orf66Q5T8R8 295 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 OR11H6Q8NGC7 330 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 PRSS3P2Q8NHM4 247 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 NOL4LQ96MY1 436 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 PARP12Q9H0J9 701 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 PEF1Q9UBV8 284 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 MALRD1Q5VYJ5 2156 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 OVOL1O14753 267 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 TMEM219Q86XT9 240 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 NPIPB3Q92617 1050 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 WDR83OSQ9Y284 106 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 PPP1R17O96001 155 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 PACRGQ96M98 296 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 A8MXK9 166 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 C11orf94C9JXX5 98 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 ISLRO14498 428 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 IGHV3-23P01764 117 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 C5orf64Q2M2E5 130 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 MAPK1IP1LQ8NDC0 245 aa6.95□□□□□ -1.3
PDLIM5-201ENST00000317968 RBFOX3A6NFN3 312 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 LINC00473A8K010 186 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 ELANEP08246 267 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 PAPPA-AS1Q5QFB9 102 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 OR1P1Q8NH06 330 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 SEC11CQ9BY50 192 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 B4DEV8 164 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 ASIPP42127 132 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 FABP9Q0Z7S8 132 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 SMUG1Q53HV7 270 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 GPHA2Q96T91 129 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 VPREB3Q9UKI3 123 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 PCSK5Q92824 1860 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 WDR87Q6ZQQ6 2873 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 FGF16O43320 207 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 RAMP3O60896 148 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 TMEM86BQ8N661 226 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 TCEAL7Q9BRU2 100 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 FAM208BQ5VWN6 2430 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 H0Y8G0 127 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 CRPP02741 224 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 COPS9Q8WXC6 57 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 CTSZQ9UBR2 303 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 USF3Q68DE3 2245 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 CGB1A6NKQ9 187 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 MPTX1A8MV57 137 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 HSPB1P04792 205 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 C11orf71Q6IPW1 123 aa6.94□□□□□ -1.3
PDLIM5-201ENST00000317968 TFF1P04155 84 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 EMP1P54849 157 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 TUSC1Q2TAM9 212 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 FAM120AOSQ5T036 256 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 C10orf105Q8TEF2 133 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 DPH3P1Q9H4G8 78 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 TMEM218A2RU14 115 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 RPL29P47914 159 aaKnown RBP6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 TCF24Q7RTU0 167 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 ANAPC16Q96DE5 110 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 NCKAP5O14513 1909 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 TRAV1-1A0A0B4J248 108 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 IGKV3-20P01619 116 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 PKIAP61925 76 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 PRADC1Q9BSG0 188 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 DCAF16Q9NXF7 216 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 OR2C1O95371 312 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 TMEM14BQ9NUH8 114 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 HOXA3O43365 443 aaPredicted RBP6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 TWIST1Q15672 202 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 NAT8Q9UHE5 227 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 TNFRSF18Q9Y5U5 241 aa6.93□□□□□ -1.3
PDLIM5-201ENST00000317968 INS-IGF2F8WCM5 200 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 ZNF56Q15929 161 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 LY6G5BQ8NDX9 201 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 KIAA2026Q5HYC2 2103 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 TEX50A0A1B0GTY4 177 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 A8MWL6 223 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 TMEM250H0YL14 139 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 ZNF207O43670 478 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 BCL2P10415 239 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 MYOZ3Q8TDC0 251 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 RANBP2P49792 3224 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 H3BUA1 57 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 HLA-DRB1P01911 266 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 LOXL1Q08397 574 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 RUSC1-AS1Q66K80 236 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 NPCDR1Q9BY65 106 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 ZNF586Q9NXT0 402 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 SIGLEC9Q9Y336 463 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 TRGV4A0A0C4DH28 118 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 PSCAO43653 123 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 CD5LO43866 347 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 VENTXO95231 258 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 FOXC2Q99958 501 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 SIGLEC15Q6ZMC9 328 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms