RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 SRPXP78539 464 aa13.09□□□□□ -0.31
TPM1-203ENST00000317516 TMEM187Q14656 261 aa13.09□□□□□ -0.31
TPM1-203ENST00000317516 TIGITQ495A1 244 aa13.09□□□□□ -0.31
TPM1-203ENST00000317516 OR1S2Q8NGQ3 325 aa13.09□□□□□ -0.31
TPM1-203ENST00000317516 A0A0B4J2A0 478 aa13.08□□□□□ -0.32
TPM1-203ENST00000317516 NUPR2A6NF83 97 aa13.08□□□□□ -0.32
TPM1-203ENST00000317516 NPY1RP25929 384 aa13.08□□□□□ -0.32
TPM1-203ENST00000317516 RND2P52198 227 aa13.08□□□□□ -0.32
TPM1-203ENST00000317516 DEFB131AP59861 70 aa13.08□□□□□ -0.32
TPM1-203ENST00000317516 YPEL3P61236 119 aaPredicted RBP13.08□□□□□ -0.32
TPM1-203ENST00000317516 ZNF124Q15973 351 aa13.08□□□□□ -0.32
TPM1-203ENST00000317516 NMSQ5H8A3 153 aa13.08□□□□□ -0.32
TPM1-203ENST00000317516 PRSS54Q6PEW0 395 aa13.08□□□□□ -0.32
TPM1-203ENST00000317516 LGI3Q8N145 548 aa13.08□□□□□ -0.32
TPM1-203ENST00000317516 SHPKQ9UHJ6 478 aa13.08□□□□□ -0.32
TPM1-203ENST00000317516 U3KQ87 197 aa13.08□□□□□ -0.32
TPM1-203ENST00000317516 IFNA10P01566 189 aa13.07□□□□□ -0.32
TPM1-203ENST00000317516 IGLC1P0CG04 106 aa13.07□□□□□ -0.32
TPM1-203ENST00000317516 OR10J1P30954 320 aa13.07□□□□□ -0.32
TPM1-203ENST00000317516 P2RY1P47900 373 aa13.07□□□□□ -0.32
TPM1-203ENST00000317516 PMS2P11Q13670 270 aa13.07□□□□□ -0.32
TPM1-203ENST00000317516 SMCO1Q147U7 214 aa13.07□□□□□ -0.32
TPM1-203ENST00000317516 RARRES2Q99969 163 aa13.07□□□□□ -0.32
TPM1-203ENST00000317516 CSMD3Q7Z407 3707 aa13.06□□□□□ -0.32
TPM1-203ENST00000317516 HELTA6NFD8 242 aa13.06□□□□□ -0.32
TPM1-203ENST00000317516 S100A5P33763 92 aa13.06□□□□□ -0.32
TPM1-203ENST00000317516 AP2S1P53680 142 aaPredicted RBP13.06□□□□□ -0.32
TPM1-203ENST00000317516 ATP5IP56385 69 aaPredicted RBP13.06□□□□□ -0.32
TPM1-203ENST00000317516 PYDC2Q56P42 97 aa13.06□□□□□ -0.32
TPM1-203ENST00000317516 STHQ8IWL8 128 aa13.06□□□□□ -0.32
TPM1-203ENST00000317516 TOMM5Q8N4H5 51 aa13.06□□□□□ -0.32
TPM1-203ENST00000317516 STXBP6Q8NFX7 210 aa13.06□□□□□ -0.32
TPM1-203ENST00000317516 KLK5Q9Y337 293 aaPredicted RBP13.06□□□□□ -0.32
TPM1-203ENST00000317516 CCDC160A6NGH7 325 aa13.05□□□□□ -0.32
TPM1-203ENST00000317516 NXPH3O95157 252 aa13.05□□□□□ -0.32
TPM1-203ENST00000317516 HNRNPCP07910 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
TPM1-203ENST00000317516 LEMD1Q68G75 181 aa13.05□□□□□ -0.32
TPM1-203ENST00000317516 CEMP1Q6PRD7 247 aaPredicted RBP13.05□□□□□ -0.32
TPM1-203ENST00000317516 LYZL2Q7Z4W2 148 aa13.05□□□□□ -0.32
TPM1-203ENST00000317516 DTD1Q8TEA8 209 aa13.05□□□□□ -0.32
TPM1-203ENST00000317516 DEDD2Q8WXF8 326 aa13.05□□□□□ -0.32
TPM1-203ENST00000317516 NPIPB3Q92617 1050 aa13.05□□□□□ -0.32
TPM1-203ENST00000317516 PRR13Q9NZ81 148 aa13.05□□□□□ -0.32
TPM1-203ENST00000317516 HSPB7Q9UBY9 170 aa13.05□□□□□ -0.32
TPM1-203ENST00000317516 DYNC2H1Q8NCM8 4307 aaKnown RBP13.05□□□□□ -0.32
TPM1-203ENST00000317516 K7EQG2 157 aa13.04□□□□□ -0.32
TPM1-203ENST00000317516 CA1P00915 261 aaPredicted RBP13.04□□□□□ -0.32
TPM1-203ENST00000317516 RD3LP0DJH9 198 aa13.04□□□□□ -0.32
TPM1-203ENST00000317516 SUPT4H1P63272 117 aaKnown RBP13.04□□□□□ -0.32
TPM1-203ENST00000317516 RBMS2Q15434 407 aaKnown RBP13.04□□□□□ -0.32
TPM1-203ENST00000317516 TMEM128Q5BJH2 165 aa13.04□□□□□ -0.32
TPM1-203ENST00000317516 OR11H2Q8NH07 326 aa13.04□□□□□ -0.32
TPM1-203ENST00000317516 OR1S1Q8NH92 325 aa13.04□□□□□ -0.32
TPM1-203ENST00000317516 ACY3Q96HD9 319 aa13.04□□□□□ -0.32
TPM1-203ENST00000317516 PFDN2Q9UHV9 154 aa13.04□□□□□ -0.32
TPM1-203ENST00000317516 U3KQE9 123 aa13.04□□□□□ -0.32
TPM1-203ENST00000317516 DUXBA0A1W2PPF3 345 aa13.03□□□□□ -0.32
TPM1-203ENST00000317516 IFNA4P05014 189 aa13.03□□□□□ -0.32
TPM1-203ENST00000317516 EWSR1Q01844 656 aaKnown RBP eCLIP13.03□□□□□ -0.32
TPM1-203ENST00000317516 KLF9Q13886 244 aaPredicted RBP13.03□□□□□ -0.32
TPM1-203ENST00000317516 TMEM41BQ5BJD5 291 aa13.03□□□□□ -0.32
TPM1-203ENST00000317516 TMED4Q7Z7H5 227 aa13.03□□□□□ -0.32
TPM1-203ENST00000317516 TMEM170AQ8WVE7 144 aa13.03□□□□□ -0.32
TPM1-203ENST00000317516 SLC25A21Q9BQT8 299 aaPredicted RBP13.03□□□□□ -0.32
TPM1-203ENST00000317516 RBKSQ9H477 322 aa13.03□□□□□ -0.32
TPM1-203ENST00000317516 TOMM40O96008 361 aa13.02□□□□□ -0.33
TPM1-203ENST00000317516 IL4P05112 153 aa13.02□□□□□ -0.33
TPM1-203ENST00000317516 C16orf54Q6UWD8 224 aa13.02□□□□□ -0.33
TPM1-203ENST00000317516 FAM24BQ8N5W8 94 aa13.02□□□□□ -0.33
TPM1-203ENST00000317516 STARD9Q9P2P6 4700 aa13.01□□□□□ -0.33
TPM1-203ENST00000317516 ZNF688P0C7X2 276 aa13.01□□□□□ -0.33
TPM1-203ENST00000317516 GPX4P36969 197 aaPredicted RBP13.01□□□□□ -0.33
TPM1-203ENST00000317516 DHRS2Q13268 280 aa13.01□□□□□ -0.33
TPM1-203ENST00000317516 MORN3Q6PF18 240 aaPredicted RBP13.01□□□□□ -0.33
TPM1-203ENST00000317516 DCANP1Q8TF63 244 aa13.01□□□□□ -0.33
TPM1-203ENST00000317516 TRIM63Q969Q1 353 aa13.01□□□□□ -0.33
TPM1-203ENST00000317516 MFFQ9GZY8 342 aa13.01□□□□□ -0.33
TPM1-203ENST00000317516 LY6G6CO95867 125 aa13□□□□□ -0.33
TPM1-203ENST00000317516 FABP1P07148 127 aa13□□□□□ -0.33
TPM1-203ENST00000317516 SPP1P10451 314 aa13□□□□□ -0.33
TPM1-203ENST00000317516 VAMP1P23763 118 aa13□□□□□ -0.33
TPM1-203ENST00000317516 NUP62P37198 522 aaPredicted RBP13□□□□□ -0.33
TPM1-203ENST00000317516 USF2Q15853 346 aaPredicted RBP13□□□□□ -0.33
TPM1-203ENST00000317516 OR51G1Q8NGK1 321 aa13□□□□□ -0.33
TPM1-203ENST00000317516 GLMPQ8WWB7 406 aa13□□□□□ -0.33
TPM1-203ENST00000317516 LINC00476Q8WZB0 136 aa13□□□□□ -0.33
TPM1-203ENST00000317516 C11orf68Q9H3H3 251 aaKnown RBP13□□□□□ -0.33
TPM1-203ENST00000317516 ZFP92A6NM28 416 aa12.99□□□□□ -0.33
TPM1-203ENST00000317516 MED6O75586 246 aa12.99□□□□□ -0.33
TPM1-203ENST00000317516 PSG1P11464 419 aa12.99□□□□□ -0.33
TPM1-203ENST00000317516 SLC25A6P12236 298 aa12.99□□□□□ -0.33
TPM1-203ENST00000317516 SNRPD3P62318 126 aaKnown RBP12.99□□□□□ -0.33
TPM1-203ENST00000317516 RAB11AP62491 216 aa12.99□□□□□ -0.33
TPM1-203ENST00000317516 SPANXN2Q5MJ10 180 aa12.99□□□□□ -0.33
TPM1-203ENST00000317516 LRTM2Q8N967 370 aa12.99□□□□□ -0.33
TPM1-203ENST00000317516 C11orf45Q8TAV5 145 aa12.99□□□□□ -0.33
TPM1-203ENST00000317516 PHLDA1Q8WV24 401 aaPredicted RBP12.99□□□□□ -0.33
TPM1-203ENST00000317516 SLC35E1Q96K37 410 aa12.99□□□□□ -0.33
TPM1-203ENST00000317516 SEPSECSQ9HD40 501 aaKnown RBP12.99□□□□□ -0.33
TPM1-203ENST00000317516 V9GYH0 126 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms