RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ATP5J2P56134 94 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 RPL15P61313 204 aaKnown RBP11.38□□□□□ -0.59
VRK3-201ENST00000316763 SELENOTP62341 195 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 ZNF90Q03938 601 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 WT1-ASQ06250 92 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 ETFRF1Q6IPR1 90 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 C11orf42Q8N5U0 333 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 TEX45Q8NA69 505 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 PERPQ96FX8 193 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 COX7A2P2O60397 106 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 BPIFB3P59826 476 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 RPL19P84098 196 aaKnown RBP11.37□□□□□ -0.59
VRK3-201ENST00000316763 MALRD1Q5VYJ5 2156 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 ZNF503Q96F45 646 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 TCRBV4S1A1TA0A5B7 111 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 E7EUB6 86 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 K7EN84 100 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 AMBPP02760 352 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 CRYBB3P26998 211 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 DEFB113Q30KQ7 82 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 TIGITQ495A1 244 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 MMD2Q8IY49 270 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 LY6G5BQ8NDX9 201 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 OR5R1Q8NH85 324 aa11.37□□□□□ -0.59
VRK3-201ENST00000316763 CGB1A6NKQ9 187 aa11.36□□□□□ -0.59
VRK3-201ENST00000316763 ERVFC1-1P60608 527 aa11.36□□□□□ -0.59
VRK3-201ENST00000316763 RPEL1Q2QD12 228 aa11.36□□□□□ -0.59
VRK3-201ENST00000316763 CENPWQ5EE01 88 aa11.36□□□□□ -0.59
VRK3-201ENST00000316763 C10orf55Q5SWW7 151 aa11.36□□□□□ -0.59
VRK3-201ENST00000316763 C10orf113Q5VZT2 155 aa11.36□□□□□ -0.59
VRK3-201ENST00000316763 THAP8Q8NA92 274 aa11.36□□□□□ -0.59
VRK3-201ENST00000316763 NPIPB3Q92617 1050 aa11.36□□□□□ -0.59
VRK3-201ENST00000316763 TMEM18Q96B42 140 aa11.36□□□□□ -0.59
VRK3-201ENST00000316763 BEX4Q9NWD9 120 aaPredicted RBP11.36□□□□□ -0.59
VRK3-201ENST00000316763 PDZD2O15018 2839 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 IGHV2-26A0A0B4J1V2 119 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 PSMB11A5LHX3 300 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 RBP4P02753 201 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 OR10J4P0C629 311 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 YPEL3P61236 119 aaPredicted RBP11.35□□□□□ -0.59
VRK3-201ENST00000316763 SUMO1P63165 101 aaKnown RBP11.35□□□□□ -0.59
VRK3-201ENST00000316763 UBE2L3P68036 154 aaKnown RBP11.35□□□□□ -0.59
VRK3-201ENST00000316763 C22orf15Q8WYQ4 148 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 MBD6Q96DN6 1003 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 FNDC4Q9H6D8 234 aaPredicted RBP11.35□□□□□ -0.59
VRK3-201ENST00000316763 PPIAL4CA0A0B4J2A2 164 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 C22orf46C9J442 243 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 PPIAL4GP0DN37 164 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 RPL27AP46776 148 aaKnown RBP11.35□□□□□ -0.59
VRK3-201ENST00000316763 JOSD1Q15040 202 aaPredicted RBP11.35□□□□□ -0.59
VRK3-201ENST00000316763 OR5AU1Q8NGC0 362 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 SSBP3Q9BWW4 388 aaPredicted RBP11.35□□□□□ -0.59
VRK3-201ENST00000316763 SLC25A2Q9BXI2 301 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 CLEC7AQ9BXN2 247 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 ASH1LQ9NR48 2969 aaKnown RBP11.35□□□□□ -0.59
VRK3-201ENST00000316763 AMMECR1Q9Y4X0 333 aaPredicted RBP11.35□□□□□ -0.59
VRK3-201ENST00000316763 INSIG2Q9Y5U4 225 aa11.35□□□□□ -0.59
VRK3-201ENST00000316763 TRAV20A0A0B4J274 112 aa11.34□□□□□ -0.59
VRK3-201ENST00000316763 A0A1W2PPI3 338 aa11.34□□□□□ -0.59
VRK3-201ENST00000316763 GCGP01275 180 aa11.34□□□□□ -0.59
VRK3-201ENST00000316763 PRSS8Q16651 343 aa11.34□□□□□ -0.59
VRK3-201ENST00000316763 FAM167A-AS1Q96KT0 104 aa11.34□□□□□ -0.59
VRK3-201ENST00000316763 PAXXQ9BUH6 204 aa11.34□□□□□ -0.59
VRK3-201ENST00000316763 BPESC1Q9GZL8 116 aa11.34□□□□□ -0.59
VRK3-201ENST00000316763 NAV2Q8IVL1 2488 aa11.34□□□□□ -0.59
VRK3-201ENST00000316763 IGHV3-72A0A0B4J1Y9 119 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 GGTLC3B5MD39 225 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 SLC17A3O00476 420 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 IGLV1-47P01700 117 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 LGALS4P56470 323 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 TNXAQ16473 311 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 CDPF1Q6NVV7 123 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 LRRC75A-AS1Q8N1F1 130 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 BEND2Q8NDZ0 799 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 OSTCQ9NRP0 149 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 TPSG1Q9NRR2 321 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 ZNF355PQ9NSJ1 428 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 BUB1B-PAK6H3BSN5 160 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 LIPFP07098 398 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 TAS2R60P59551 318 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 PKIAP61925 76 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 SSBP2P81877 361 aaPredicted RBP11.33□□□□□ -0.6
VRK3-201ENST00000316763 MISP3Q96FF7 219 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 RITA1Q96K30 269 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 PRDM13Q9H4Q3 707 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 V9GYV3 84 aa11.33□□□□□ -0.6
VRK3-201ENST00000316763 FLNBO75369 2602 aaKnown RBP11.32□□□□□ -0.6
VRK3-201ENST00000316763 LOC105371242A0A075B767 164 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 TRBV9A0A0B4J1U6 114 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 TRAV5A0A0B4J249 113 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 IGHV1-3A0A0C4DH29 117 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 IGLC7A0M8Q6 106 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 TSTD3H0UI37 97 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 CORTO00230 105 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 REG1AP05451 166 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 LMO4P61968 165 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 OR5I1Q13606 314 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 MRGPRG-AS1Q2M3A8 158 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 PVRIGQ6DKI7 326 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 GBGT1Q8N5D6 347 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms