RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 RASL11BQ9BPW5 248 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 NPVFQ9HCQ7 196 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 NAT8BQ9UHF3 227 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 IGKV1D-17A0A075B6S4 117 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 LOC102723971A0A1B0GUV8 181 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 DEFB108AA8MXU0 73 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 H3BVH4 76 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 J3QR06 171 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 NXPH3O95157 252 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 GNLYP22749 145 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 RPL13AP40429 203 aaKnown RBP4.96□□□□□ -1.62
SEC22A-201ENST00000309934 ID3Q02535 119 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 CYB561D1Q8N8Q1 229 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 RAX2Q96IS3 184 aa4.96□□□□□ -1.62
SEC22A-201ENST00000309934 CACNA1CQ13936 2221 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 SHISA9B4DS77 424 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 CXCL1P09341 107 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 RPL27AP46776 148 aaKnown RBP4.95□□□□□ -1.62
SEC22A-201ENST00000309934 SEC61GP60059 68 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 PSG9Q00887 426 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 SLC25A48Q6ZT89 311 aaKnown RBP4.95□□□□□ -1.62
SEC22A-201ENST00000309934 DTX2Q86UW9 622 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 MAP1LC3AQ9H492 121 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 YTHDF2Q9Y5A9 579 aaKnown RBP4.95□□□□□ -1.62
SEC22A-201ENST00000309934 SCGB1C2P0DMR2 95 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 IAPPP10997 89 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 DUTP33316 252 aaKnown RBP4.95□□□□□ -1.62
SEC22A-201ENST00000309934 MEIG1Q5JSS6 88 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 ZNRF1Q8ND25 227 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 ST6GALNAC6Q969X2 333 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 COQ2Q96H96 371 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 RARRES2Q99969 163 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 PKIGQ9Y2B9 76 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 RNF222A6NCQ9 220 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 F8VVB4 439 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 F8VWA3 439 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 J3QLI3 93 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 CD33P20138 364 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 TSPOP30536 169 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 MPV17L2Q567V2 206 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 TEPPQ6URK8 271 aa4.95□□□□□ -1.62
SEC22A-201ENST00000309934 ZNF331Q9NQX6 463 aaPredicted RBP4.95□□□□□ -1.62
SEC22A-201ENST00000309934 BEX4Q9NWD9 120 aaPredicted RBP4.95□□□□□ -1.62
SEC22A-201ENST00000309934 FOXA2Q9Y261 457 aaPredicted RBP4.95□□□□□ -1.62
SEC22A-201ENST00000309934 GRIFINA4D1Z8 144 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 FAM24AA6NFZ4 105 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 ATP5LO75964 103 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 DYNLT3P51808 116 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 ZNF787Q6DD87 383 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 WDR86Q86TI4 376 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 RNF183Q96D59 192 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 MRPL32Q9BYC8 188 aaKnown RBP4.94□□□□□ -1.62
SEC22A-201ENST00000309934 LINC00574Q9H8X3 128 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 CTXND1A0A1B0GTU2 59 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 SMIM17P0DL12 118 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 TIGITQ495A1 244 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 FAM216BQ8N7L0 139 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 TECRQ9NZ01 308 aaKnown RBP4.94□□□□□ -1.62
SEC22A-201ENST00000309934 PTPRQQ9UMZ3 2332 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 G3V4G9 280 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 UPK2O00526 184 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 PSPNO60542 156 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 COX7A1P24310 79 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 NMSQ5H8A3 153 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 TCTEX1D4Q5JR98 221 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 PRSS57Q6UWY2 283 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 C11orf53Q8IXP5 236 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 OR4F5Q8NH21 305 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 OR4F4Q96R69 305 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 CRIM1Q9NZV1 1036 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 PSG8Q9UQ74 426 aa4.94□□□□□ -1.62
SEC22A-201ENST00000309934 C15orf61A6NNL5 157 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 K7EM74 188 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 IGHV1-8P0DP01 117 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 TNXAQ16473 311 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 PRR30Q53SZ7 412 aaPredicted RBP4.93□□□□□ -1.62
SEC22A-201ENST00000309934 ZDHHC16Q969W1 377 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 TCF19Q9Y242 345 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 COX7A2P2O60397 106 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 LILRA1O75019 489 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 APOMO95445 188 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 MOSP00540 346 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 EGR1P18146 543 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 PRTN3P24158 256 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 SUPT4H1P63272 117 aaKnown RBP4.93□□□□□ -1.62
SEC22A-201ENST00000309934 RELBQ01201 579 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 FAM162BQ5T6X4 162 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 C16orf82Q7Z2V1 217 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 CENPVQ7Z7K6 275 aaPredicted RBP4.93□□□□□ -1.62
SEC22A-201ENST00000309934 ZNF418Q8TF45 676 aaPredicted RBP4.93□□□□□ -1.62
SEC22A-201ENST00000309934 GRAMD2BQ96HH9 432 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 SPAG8Q99932 426 aaPredicted RBP4.93□□□□□ -1.62
SEC22A-201ENST00000309934 C1QTNF4Q9BXJ3 329 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 TNFRSF18Q9Y5U5 241 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 A0A087WWC5 75 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 UBE2L5PA0A1B0GUS4 154 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 C17orf98A8MV24 154 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 ADORA2A-AS1P86434 159 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 C8orf46Q8TAG6 207 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 TMEM167AQ8TBQ9 72 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms