RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 LEMD1Q68G75 181 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 ZNF207O43670 478 aaKnown RBP9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 TGFAP01135 160 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 MGPP08493 103 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 PTTG1IPP53801 180 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 MST1LQ2TV78 715 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 PVRIGQ6DKI7 326 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 RNF125Q96EQ8 232 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 GPR82Q96P67 336 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 NCOR1P1Q9H4R4 102 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 SEPSECSQ9HD40 501 aaKnown RBP9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 CKS2P33552 79 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 PAX9P55771 341 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 TPTE2P1Q5T6R2 138 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 EBLN2Q6P2I7 272 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 CLEC19AQ6UXS0 136 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 ZNRD1Q9P1U0 126 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 PIEZO1Q92508 2521 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 PRR14LQ5THK1 2151 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 CD99P14209 185 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 KLRD1Q13241 179 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 DUX4L9Q6RFH8 374 aaPredicted RBP9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 TMEM183AQ8IXX5 376 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 OR8A1Q8NGG7 326 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 OCC1Q8TAD7 63 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 RNF5Q99942 180 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 BUB1B-PAK6H3BSN5 160 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 VAMP3Q15836 100 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 SPATA31B1PQ5VZV4 182 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 NEU1Q99519 415 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 DKK4Q9UBT3 224 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 CDC42EP3Q9UKI2 254 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 IGHV3-66A0A0C4DH42 116 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 M0R143 59 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 IL15RAQ13261 267 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 ALPK3Q96L96 1907 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 HBBP68871 147 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 CX3CL1P78423 397 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 TRAV5A0A0B4J249 113 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 COLCA2A8K830 154 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 FMC1Q96HJ9 113 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 IMMP2LQ96T52 175 aa9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 PARD6GQ9BYG4 376 aaPredicted RBP9.33□□□□□ -0.92
PCDHGC3-201ENST00000308177 A0A0G2JLM5 398 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 C15orf65H3BRN8 121 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 GNG5P63218 68 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 FAM71F2Q6NXP2 309 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 VMO1Q7Z5L0 202 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 COL25A1Q9BXS0 654 aaPredicted RBP9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 RNASE7Q9H1E1 156 aaKnown RBP9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 PTPRQQ9UMZ3 2332 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 ADCYAP1P18509 176 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 C17orf58Q2M2W7 97 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 TMEM155Q4W5P6 130 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 AGMATQ9BSE5 352 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 OTORQ9NRC9 128 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 EPDR1Q9UM22 224 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 SIGLEC9Q9Y336 463 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 TRAV9-1A0A075B6T8 112 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 M0R1W7 72 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 SPSB3Q6PJ21 355 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 C11orf53Q8IXP5 236 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 CYYR1Q96J86 154 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 ATG101Q9BSB4 218 aa9.32□□□□□ -0.92
PCDHGC3-201ENST00000308177 OOSP1A8MZH6 123 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 RHOGP84095 191 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 CENPVQ7Z7K6 275 aaPredicted RBP9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 MINOS1Q5TGZ0 78 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 ELOVL1Q9BW60 279 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 TMEM242Q9NWH2 141 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 MINOS1-NBL1R4GNA1 71 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 LEPROTL1O95214 131 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 RNASE2P10153 161 aaKnown RBP9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 TEX38Q6PEX7 206 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 OR4B1Q8NGF8 309 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 C8orf46Q8TAG6 207 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 TRAV40A0A0B4J280 105 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 HOXA5P20719 270 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 TEX36Q5VZQ5 186 aa9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 RPP21Q9H633 154 aaKnown RBP9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 ZMAT5Q9UDW3 170 aaKnown RBP9.31□□□□□ -0.92
PCDHGC3-201ENST00000308177 C9JQL5 133 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 GPX1P07203 203 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 FOXA3P55318 350 aaPredicted RBP9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 SLX1AQ9BQ83 275 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 OSTCQ9NRP0 149 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 MLANAQ16655 118 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 ZNF600Q6ZNG1 722 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 IGHV3-11P01762 117 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 PSG1P11464 419 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 C5orf64Q2M2E5 130 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 TRBV24-1A0A075B6N3 115 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 ZNF134P52741 427 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 TMEM14BQ9NUH8 114 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 PHLDA3Q9Y5J5 127 aa9.3□□□□□ -0.92
PCDHGC3-201ENST00000308177 PRTN3P24158 256 aa9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 LOXP28300 417 aaPredicted RBP9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 HIST1H1AQ02539 215 aaPredicted RBP9.29□□□□□ -0.92
PCDHGC3-201ENST00000308177 F11RQ9Y624 299 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms