RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 WNT10AQ9GZT5 417 aa9.4□□□□□ -0.9
TRIM40-205ENST00000307859 SEPSECSQ9HD40 501 aaKnown RBP9.4□□□□□ -0.9
TRIM40-205ENST00000307859 ABCA1O95477 2261 aa9.4□□□□□ -0.91
TRIM40-205ENST00000307859 NPIPB5A8MRT5 1133 aa9.39□□□□□ -0.91
TRIM40-205ENST00000307859 MT-CO2P00403 227 aa9.39□□□□□ -0.91
TRIM40-205ENST00000307859 IGHV3-48P01763 117 aa9.39□□□□□ -0.91
TRIM40-205ENST00000307859 GATA2P23769 480 aaPredicted RBP9.39□□□□□ -0.91
TRIM40-205ENST00000307859 ASPHD1Q5U4P2 390 aa9.39□□□□□ -0.91
TRIM40-205ENST00000307859 SPATA31B1PQ5VZV4 182 aa9.39□□□□□ -0.91
TRIM40-205ENST00000307859 GATAD1Q8WUU5 269 aa9.39□□□□□ -0.91
TRIM40-205ENST00000307859 TRGV9Q99603 122 aa9.39□□□□□ -0.91
TRIM40-205ENST00000307859 FUT9Q9Y231 359 aa9.39□□□□□ -0.91
TRIM40-205ENST00000307859 IGHV7-81A0A0B4J1V7 117 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 TMEM250H0YL14 139 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 IGHV4-38-2P0DP08 117 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 AWAT1Q58HT5 328 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 FAM78BQ5VT40 261 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 MIR17HGQ75NE6 70 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 IQCF2Q8IXL9 164 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 SUN5Q8TC36 379 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 RNF2Q99496 336 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 FAM103A1Q9BTL3 118 aaKnown RBP9.38□□□□□ -0.91
TRIM40-205ENST00000307859 MRPL32Q9BYC8 188 aaKnown RBP9.38□□□□□ -0.91
TRIM40-205ENST00000307859 MEGF9Q9H1U4 602 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 C7orf69Q9H7B7 122 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 TNFRSF19Q9NS68 423 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 IGHV3OR16-10A0A075B7F0 116 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 H3BQ15 152 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 K7EIM0 57 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 PAGE4O60829 102 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 EGR2P11161 476 aaPredicted RBP9.38□□□□□ -0.91
TRIM40-205ENST00000307859 GCHFRP30047 84 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 ZNF90Q03938 601 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 LOXL1Q08397 574 aaPredicted RBP9.38□□□□□ -0.91
TRIM40-205ENST00000307859 RHEBQ15382 184 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 DEFB113Q30KQ7 82 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 TTC9CQ8N5M4 171 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.38□□□□□ -0.91
TRIM40-205ENST00000307859 LINC01356Q8N9X3 169 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 NANPQ8TBE9 248 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 TMEM37Q8WXS4 190 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 HIF1ANQ9NWT6 349 aa9.38□□□□□ -0.91
TRIM40-205ENST00000307859 IGLV11-55A0A075B6I3 123 aa9.37□□□□□ -0.91
TRIM40-205ENST00000307859 C7orf77A4D0Y5 90 aa9.37□□□□□ -0.91
TRIM40-205ENST00000307859 CEBPGP53567 150 aa9.37□□□□□ -0.91
TRIM40-205ENST00000307859 BRD3OSQ6XYD6 125 aa9.37□□□□□ -0.91
TRIM40-205ENST00000307859 OR1L4Q8NGR5 311 aa9.37□□□□□ -0.91
TRIM40-205ENST00000307859 OR4X1Q8NH49 305 aa9.37□□□□□ -0.91
TRIM40-205ENST00000307859 PIFOQ8TCI5 191 aa9.37□□□□□ -0.91
TRIM40-205ENST00000307859 PFDN5Q99471 154 aa9.37□□□□□ -0.91
TRIM40-205ENST00000307859 TXNDC17Q9BRA2 123 aa9.37□□□□□ -0.91
TRIM40-205ENST00000307859 TECRQ9NZ01 308 aaKnown RBP9.37□□□□□ -0.91
TRIM40-205ENST00000307859 PUS1Q9Y606 427 aaKnown RBP eCLIP9.37□□□□□ -0.91
TRIM40-205ENST00000307859 A0A0U1RQK1 487 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 M0R036 132 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 IGLC1P0CG04 106 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 TAS2R45P59539 299 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 BPIFB3P59826 476 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 KLF17Q5JT82 389 aaPredicted RBP9.36□□□□□ -0.91
TRIM40-205ENST00000307859 TMEM88Q6PEY1 159 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 PQLC2Q6ZP29 291 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 CBLN2Q8IUK8 224 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 C5orf56Q8N8D9 126 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 WFDC11Q8NEX6 87 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 RBM14Q96PK6 669 aaKnown RBP9.36□□□□□ -0.91
TRIM40-205ENST00000307859 FANCD2OSQ96PS1 177 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 RASL11BQ9BPW5 248 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 HSPB9Q9BQS6 159 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 NIPSNAP3BQ9BS92 247 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 DNAJC4Q9NNZ3 241 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 ARL2-SNX15V9GYD0 113 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 ATRQ13535 2644 aa9.36□□□□□ -0.91
TRIM40-205ENST00000307859 IGHV3-21A0A0B4J1V1 117 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 C11orf94C9JXX5 98 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 J3QLI3 93 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 NUPL2O15504 423 aaKnown RBP9.35□□□□□ -0.91
TRIM40-205ENST00000307859 COX7A2P2O60397 106 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 LY6G6DO95868 133 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 PLP1P60201 277 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 KLK9Q2XQG4 91 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 PATE2Q6UY27 113 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 OR4F5Q8NH21 305 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 SGMS2Q8NHU3 365 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 TVP23CQ96ET8 276 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 ZNF503Q96F45 646 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 OR4F4Q96R69 305 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 C20orf24Q9BUV8 137 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 TMEM167BQ9NRX6 74 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 KLK9Q9UKQ9 250 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 MOB4Q9Y3A3 225 aa9.35□□□□□ -0.91
TRIM40-205ENST00000307859 ELOA3CA0A087WX78 387 aaPredicted RBP9.34□□□□□ -0.91
TRIM40-205ENST00000307859 PDE6DO43924 150 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 CLN5O75503 358 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 AVPP01185 164 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 C8orf88P0DMB2 117 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 ATP5G3P48201 142 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 UBE2G2P60604 165 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 PNRC1Q12796 327 aaPredicted RBP9.34□□□□□ -0.91
TRIM40-205ENST00000307859 C10orf113Q5VZT2 155 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 FAM167A-AS1Q96KT0 104 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms