RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CA1P00915 261 aaPredicted RBP11.55□□□□□ -0.56
PRKCB-201ENST00000303531 TGFAP01135 160 aa11.55□□□□□ -0.56
PRKCB-201ENST00000303531 CADP27708 2225 aa11.55□□□□□ -0.56
PRKCB-201ENST00000303531 TIMM23O14925 209 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 RHOGP84095 191 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 TRAV5A0A0B4J249 113 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 H3BRM9 83 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 NUDT11Q96G61 164 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 OR4X2Q8NGF9 303 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 GNB1LQ9BYB4 327 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 CD7P09564 240 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 NDUFAF3Q9BU61 184 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 TYMSP04818 313 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 LINC00614P0C842 121 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 PI4KAP42356 2102 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 LHFPL4Q7Z7J7 247 aa11.54□□□□□ -0.56
PRKCB-201ENST00000303531 PSMG4Q5JS54 123 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 CXCL1P09341 107 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 SELLP14151 372 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 FBLN7Q53RD9 439 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 ANK1P16157 1881 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 C5orf63A6NC05 138 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 PPIFP30405 207 aaKnown RBP11.53□□□□□ -0.56
PRKCB-201ENST00000303531 A0A1W2PRX2 142 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 PRB4P10163 310 aaPredicted RBP11.53□□□□□ -0.56
PRKCB-201ENST00000303531 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 PNRC2Q9NPJ4 139 aaKnown RBP11.53□□□□□ -0.56
PRKCB-201ENST00000303531 TOMM7Q9P0U1 55 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 PSPNO60542 156 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 HBDP02042 147 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 SRRM5B3KS81 715 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 THBDP07204 575 aa11.53□□□□□ -0.56
PRKCB-201ENST00000303531 H3BUT2 72 aa11.52□□□□□ -0.56
PRKCB-201ENST00000303531 C8orf46Q8TAG6 207 aa11.52□□□□□ -0.56
PRKCB-201ENST00000303531 COQ2Q96H96 371 aa11.52□□□□□ -0.56
PRKCB-201ENST00000303531 GBF1Q92538 1859 aa11.52□□□□□ -0.56
PRKCB-201ENST00000303531 HIST1H2BLQ99880 126 aa11.52□□□□□ -0.56
PRKCB-201ENST00000303531 ZNF257Q9Y2Q1 563 aa11.52□□□□□ -0.56
PRKCB-201ENST00000303531 DIDO1Q9BTC0 2240 aaKnown RBP11.52□□□□□ -0.57
PRKCB-201ENST00000303531 SCN5AQ14524 2016 aa11.52□□□□□ -0.57
PRKCB-201ENST00000303531 C10orf55Q5SWW7 151 aa11.52□□□□□ -0.57
PRKCB-201ENST00000303531 TSKUQ8WUA8 353 aa11.52□□□□□ -0.57
PRKCB-201ENST00000303531 ST20Q9HBF5 79 aa11.52□□□□□ -0.57
PRKCB-201ENST00000303531 TRAV9-2A0A087WT02 112 aa11.52□□□□□ -0.57
PRKCB-201ENST00000303531 TIMP3P35625 211 aa11.52□□□□□ -0.57
PRKCB-201ENST00000303531 SAMD13Q5VXD3 122 aa11.52□□□□□ -0.57
PRKCB-201ENST00000303531 COLCA2A8K830 154 aa11.52□□□□□ -0.57
PRKCB-201ENST00000303531 GFI1BQ5VTD9 330 aa11.52□□□□□ -0.57
PRKCB-201ENST00000303531 SPATA31B1PQ5VZV4 182 aa11.52□□□□□ -0.57
PRKCB-201ENST00000303531 RPUSD1Q9UJJ7 312 aaKnown RBP11.52□□□□□ -0.57
PRKCB-201ENST00000303531 RNF144BQ7Z419 303 aa11.52□□□□□ -0.57
PRKCB-201ENST00000303531 DPH3Q96FX2 82 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 TMEM242Q9NWH2 141 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 STAG3L3P0CL85 134 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 HGFACQ04756 655 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 PEMTQ9UBM1 199 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 FAM166AQ6J272 317 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 TRGV2A0A075B6R0 118 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 MYOD1P15172 320 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 EVI2AP22794 236 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 NMSQ5H8A3 153 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 MPDZO75970 2070 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 MLNRO43193 412 aa11.51□□□□□ -0.57
PRKCB-201ENST00000303531 C17orf82Q86X59 251 aaPredicted RBP11.51□□□□□ -0.57
PRKCB-201ENST00000303531 IGKV1-5P01602 117 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 C5orf24Q7Z6I8 188 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 KIR3DL3Q8N743 410 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 TMEM167AQ8TBQ9 72 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 TRBV24-1A0A075B6N3 115 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 TRAV21A0A0B4J279 112 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 CD59P13987 128 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 SRSF1Q07955 248 aaKnown RBP eCLIP11.5□□□□□ -0.57
PRKCB-201ENST00000303531 RFNGQ9Y644 331 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 WNK2Q9Y3S1 2297 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 LDLRAD2Q5SZI1 272 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 NUDT10Q8NFP7 164 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 TNFRSF14Q92956 283 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 C5orf30Q96GV9 206 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 OR5AN1Q8NGI8 311 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 VKORC1Q9BQB6 163 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 NHP2Q9NX24 153 aaKnown RBP11.5□□□□□ -0.57
PRKCB-201ENST00000303531 CACNG7P62955 275 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 HIST3H2BBQ8N257 126 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 CD177Q8N6Q3 437 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 NXT2Q9NPJ8 142 aaKnown RBP11.5□□□□□ -0.57
PRKCB-201ENST00000303531 MED12Q93074 2177 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 IGKV3D-20A0A0C4DH25 116 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 IL18BPO95998 194 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 C10orf126Q8N4M7 172 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 VCX2Q9H322 139 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 PLSCR4Q9NRQ2 329 aa11.5□□□□□ -0.57
PRKCB-201ENST00000303531 TRAV1-1A0A0B4J248 108 aa11.49□□□□□ -0.57
PRKCB-201ENST00000303531 IGHV2-26A0A0B4J1V2 119 aa11.49□□□□□ -0.57
PRKCB-201ENST00000303531 DPM2O94777 84 aa11.49□□□□□ -0.57
PRKCB-201ENST00000303531 IFI27P40305 119 aaPredicted RBP11.49□□□□□ -0.57
PRKCB-201ENST00000303531 Q0VFX4 171 aa11.49□□□□□ -0.57
PRKCB-201ENST00000303531 MGST2Q99735 147 aa11.49□□□□□ -0.57
PRKCB-201ENST00000303531 CNTFRP26992 372 aa11.49□□□□□ -0.57
PRKCB-201ENST00000303531 RPP25LQ8N5L8 163 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms