RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 SMIM2Q9BVW6 85 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 SRRM4A7MD48 611 aaKnown RBP11.9□□□□□ -0.5
HIPK3-201ENST00000303296 TM4SF5O14894 197 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 PLAC1Q9HBJ0 212 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 PSG8Q9UQ74 426 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 FAM90A18PA6NE21 464 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 FAM90A16PA6NEW6 464 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 FAM90A9PA6NNJ1 464 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 FAM90A5PA8MXJ8 464 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 RS1O15537 224 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 CD5P06127 495 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 FAM90A15PP0C7V4 464 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 FAM90A14PP0C7W9 464 aa11.9□□□□□ -0.5
HIPK3-201ENST00000303296 ZNF501Q96CX3 271 aaPredicted RBP11.9□□□□□ -0.5
HIPK3-201ENST00000303296 TJP1Q07157 1748 aa11.9□□□□□ -0.51
HIPK3-201ENST00000303296 SOCS3O14543 225 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 A0A1W2PPI3 338 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 TRIOBPQ9H2D6 2365 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 UBE2BP63146 152 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 RBM3P98179 157 aaKnown RBP11.89□□□□□ -0.51
HIPK3-201ENST00000303296 Q71RC1 249 aaPredicted RBP11.89□□□□□ -0.51
HIPK3-201ENST00000303296 BHLHA9Q7RTU4 235 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 FOXS1O43638 330 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 CLPSL2Q6UWE3 100 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 POC1AQ8NBT0 407 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 SLC25A39Q9BZJ4 359 aaPredicted RBP11.89□□□□□ -0.51
HIPK3-201ENST00000303296 C5P01031 1676 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 A0A087WWL8 130 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 TFF1P04155 84 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 CD55P08174 381 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 CSTL1Q9H114 145 aa11.89□□□□□ -0.51
HIPK3-201ENST00000303296 FOXD3Q9UJU5 478 aaPredicted RBP11.89□□□□□ -0.51
HIPK3-201ENST00000303296 IGHV3-16A0A0C4DH30 117 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 UCP1P25874 307 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 PMVKQ15126 192 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 PPP1R32Q7Z5V6 425 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 PLEKHB2Q96CS7 222 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 BCL6BQ8N143 479 aaPredicted RBP11.88□□□□□ -0.51
HIPK3-201ENST00000303296 A0A1W2PRS3 328 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 TMEM30BQ3MIR4 351 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 FAM90A7PA6NKC0 464 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 FAM90A22PA8MWA6 464 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 FAM90A12PA8MX19 464 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 FAM90A23PA8MXZ1 464 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 GAS1P54826 345 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 KLF5Q13887 457 aaPredicted RBP11.88□□□□□ -0.51
HIPK3-201ENST00000303296 SMRP1Q8NCR6 262 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 DEPPQ9NTK1 212 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 DKK4Q9UBT3 224 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 A0A087X0K7 114 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 CECR9P0C854 216 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 SAXO1Q8IYX7 474 aa11.88□□□□□ -0.51
HIPK3-201ENST00000303296 F2Z2F3 143 aa11.87□□□□□ -0.51
HIPK3-201ENST00000303296 HLA-DQB1P01920 261 aa11.87□□□□□ -0.51
HIPK3-201ENST00000303296 Q96M66 194 aa11.87□□□□□ -0.51
HIPK3-201ENST00000303296 EP300Q09472 2414 aaPredicted RBP11.87□□□□□ -0.51
HIPK3-201ENST00000303296 NXPH4O95158 308 aa11.87□□□□□ -0.51
HIPK3-201ENST00000303296 INAFM2P0DMQ5 153 aa11.87□□□□□ -0.51
HIPK3-201ENST00000303296 SPRED2Q7Z698 418 aa11.87□□□□□ -0.51
HIPK3-201ENST00000303296 SCRT2Q9NQ03 307 aa11.87□□□□□ -0.51
HIPK3-201ENST00000303296 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
HIPK3-201ENST00000303296 C1QL4Q86Z23 238 aa11.87□□□□□ -0.51
HIPK3-201ENST00000303296 A0A096LPF7 62 aa11.87□□□□□ -0.51
HIPK3-201ENST00000303296 RASL11AQ6T310 242 aa11.87□□□□□ -0.51
HIPK3-201ENST00000303296 Q6ZT83 130 aa11.87□□□□□ -0.51
HIPK3-201ENST00000303296 MESP2Q0VG99 397 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 D6R8Y8 96 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 HSD52Q0P140 79 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 TMEM144Q7Z5S9 345 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 A0A1W2PPV9 198 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 TRACP01848 142 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 PSG1P11464 419 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 NBL1P41271 181 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 RPL23P62829 140 aaKnown RBP11.86□□□□□ -0.51
HIPK3-201ENST00000303296 TIMM21Q9BVV7 248 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 DAD1P61803 113 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 CELA3BP08861 270 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 C1QTNF9P0C862 333 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 SPSB3Q6PJ21 355 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 LINC00477Q96M19 166 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 MYMXA0A1B0GTQ4 84 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 HOXB1P14653 301 aaPredicted RBP11.86□□□□□ -0.51
HIPK3-201ENST00000303296 TCF15Q12870 199 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 FAM90A2PQ658T7 463 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 EXOC3-AS1Q8N2X6 119 aa11.86□□□□□ -0.51
HIPK3-201ENST00000303296 H2BFSP57053 126 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 SLC22A18ASQ8N1D0 253 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 hDV102S1A0JD36 115 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 RAMP1O60894 148 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 TBX6O95947 436 aaPredicted RBP11.85□□□□□ -0.51
HIPK3-201ENST00000303296 SP9P0CG40 484 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 FSTP19883 344 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 FAM110DQ8TAY7 271 aaPredicted RBP11.85□□□□□ -0.51
HIPK3-201ENST00000303296 SAA2-SAA4A0A096LPE2 208 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 FAM90A10PA6NDY2 464 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 FAM90A20PA6NIJ5 464 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 FAM90A8PA6NJQ4 464 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 FAM90A13PP0C7W8 464 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 FAM90A24PP0C7X0 464 aa11.85□□□□□ -0.51
HIPK3-201ENST00000303296 SAA2P0DJI9 122 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms